Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01254 ATGTCGGGGTTACTTAATTCTTCTCTGAATGGATCTGCTTCAAATCTTCCAGATGGTGCCGGACGATCTTTTGCGACATCGTTTTCTGGTCAGTCTGGTGCAGCCTCCCCAATTTTTCATCACACTGGAGCTATTCAAGGATTGCACAATATTCATGGGAGCTTTAATGTTCCCAACATGCCCGGTTCACTCACATCGAGAAATTCAACTATAAATAATGTGCCATCGGGTGGCGTTCAACATTCCACTGGAAGTCTTTCTAGTGGAAGATTTACATCCAACAATCTACCAGTTGCATTGTCTCAACTATCTCATGGAAGCACCCATGGACATTCAGGAGTCACCAATAGAGGAGGTATAAGTGTTGTAGGAAACCCTGGATTTAGTAGTAGCACAAATGGAGTTGGTGGTTCTATTCCTGGGATTCTTCCTACATCTGGTGCAATTGGTAACCGAAATGCTGTTCCAGGATTGGGAGTATCCCCAATTTTGGGAAATGCAGGTCCTCGAATCACTAGTTCTGTGGGAAACATGGTTGGTGGAGGGAATATCGGAAGGACTGGTGGAGGATTGTCTGTGCCTGCTCTTGCGTCTCGTCTAAATTTGGGTGCAAACAGTGGATCCAGTGGTTTAGGAATGCAAGGACAGAATCGATTAATGAGTGGTGTGCTTCCACAAGGATCTCCACAGGTAATTTCAATGCTAGGAAATTCTTATCCCAGCGCTGGAGGTCCACTTTCCCAAAGCCATGTTCAAGCAGTAAGTAACTTGAACTCTATGGGAATGTTGAATGATGTGAATACCAATGACAGCTCCCCTTTTGATATCAATGACTTCCCTCAACTGACAAGTCGTCCCAGTTCTGCTGGAGGGCCTCAAGGACAGTTGGGTTCTTTACGAAAGCAGGGTCTTGGCGTCAGTCCCATTGTTCAACAAAACCAAGAGTTTAGCATTCAGAATGAAGATTTCCCAGCTTTACCAGGATTCAAAGGCGGTAATGCAGATTATGCTATGGACATGCACCAGAAAGAACAACTTCATGACAACGCTGTACCAATGATGCAATCACAGCATTTCTCTATGGGAAGGTCAGCTGGTTTCAGCTTGGGGGGTACATATTCGTCACATCGAGCACAACAACAACAACATGCTCCTTCAGTCAGTAGTGGCAATGTCTCTTTTTCATCCGTTAACAACCAGGATCTTCTCCATTTGCATGGATCAGATATTTTCCCATCTCCACATTCAACCTATCATTCACAGACCAGTGGACCTCCTGGTATTGGATTAAGGCCTTTAAATTCTCCAAATACAGTTTCTGGTATGGGTTCATACGACCAGCTTATCCAGCAATATCAACAGCATCAAAACCAGTCGCAGTTCCGCCTACAAATGTCAGCTGTAAATCAATCATTTAGGGATCAGGGCATGAAGTCTATTCAAACCACACAACCAGATCCATTTGGTTTACTTGGCTTGTTAAGTGTGATCAGGATGAGTGATCCTGACCTGACGTCTCTAGCTCTTGGAATTGATCTAACTACACTGGGGTTAAATTTGAATTCATCAGAAAATCTTCACAAGACCTTTGGTTCTCCATGGTCTGATGAACCTGCTAAGGGCGATCCAGAGTTTAATGTGCCACAATGTTATTATGCTAAACAGCCACCTGCTCTACATCAAGGATACTTTTCAAAGTTTTCGGTGGAAACATTGTTTTACATATTTTACAGCATGCCCAAAGATGAAGCACAATTATATGCCTCCAATGAGCTTTACAACAGAGGTTGGTTTTATCACAAGGAACATCGTTTGTGGTTTATAAGAGTTCCCAACATGGAGCCGCTGGTTAAAACAAACACATACGAGAGGGGATCTTATCACTGTTTCGAACCAAGCATATTTGAAACCGTCCGCAAGGATAATTTTGTTCTTCATTATGAAATGTTGGAAAAGAGACCCCATCTGCCTCAACATTGA 1980 0.4328 MSGLLNSSLNGSASNLPDGAGRSFATSFSGQSGAASPIFHHTGAIQGLHNIHGSFNVPNMPGSLTSRNSTINNVPSGGVQHSTGSLSSGRFTSNNLPVALSQLSHGSTHGHSGVTNRGGISVVGNPGFSSSTNGVGGSIPGILPTSGAIGNRNAVPGLGVSPILGNAGPRITSSVGNMVGGGNIGRTGGGLSVPALASRLNLGANSGSSGLGMQGQNRLMSGVLPQGSPQVISMLGNSYPSAGGPLSQSHVQAVSNLNSMGMLNDVNTNDSSPFDINDFPQLTSRPSSAGGPQGQLGSLRKQGLGVSPIVQQNQEFSIQNEDFPALPGFKGGNADYAMDMHQKEQLHDNAVPMMQSQHFSMGRSAGFSLGGTYSSHRAQQQQHAPSVSSGNVSFSSVNNQDLLHLHGSDIFPSPHSTYHSQTSGPPGIGLRPLNSPNTVSGMGSYDQLIQQYQQHQNQSQFRLQMSAVNQSFRDQGMKSIQTTQPDPFGLLGLLSVIRMSDPDLTSLALGIDLTTLGLNLNSSENLHKTFGSPWSDEPAKGDPEFNVPQCYYAKQPPALHQGYFSKFSVETLFYIFYSMPKDEAQLYASNELYNRGWFYHKEHRLWFIRVPNMEPLVKTNTYERGSYHCFEPSIFETVRKDNFVLHYEMLEKRPHLPQH 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01254 659 MobiDBLite consensus disorder prediction 264 295 - -
Vian5g01254 659 MobiDBLite consensus disorder prediction 264 300 - -
Vian5g01254 659 PANTHER CCR4 NOT-RELATED 48 653 IPR040168 GO:0030015
Vian5g01254 659 FunFam probable NOT transcription complex subunit VIP2 isoform X1 477 659 - -
Vian5g01254 659 MobiDBLite consensus disorder prediction 370 393 - -
Vian5g01254 659 Pfam NOT2 / NOT3 / NOT5 family 528 650 IPR007282 GO:0006355
Vian5g01254 659 Gene3D - 478 659 IPR038635 -
Vian5g01254 659 MobiDBLite consensus disorder prediction 413 442 - -
Vian5g01254 659 MobiDBLite consensus disorder prediction 59 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01254 Vian-Chr5 35279369 35286873 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01254 K12605 - gmx:100807026 1232.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01254 5 35279369 35286873 Vian5g01254 5 35279369 35286873 ECH