Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01221 ATGGAGTGGGTGAAGATGAAGGAGTGCGCTAGGGAGTTCATGGTTGGGGTGGCGGAGATGACGGTGGAGTTCGGAAAAGGTTGCAGAGACATAGTCAAGCAGAGTTTGGTCAATGAAGATTCATTTATTGTCAAAAACTTAGGGAGAGATTCCTACATTGGAAAAAGACTCAGAGGACCCTGTGCCAAGCTTTTTGCCAAATTGAGCTTCTTCAACGAGTATTTGCCCGAGGATAAGGATCCTCTTCACGCTTGGTCCGTCATTTTCTTCGTTTTCCTTCTCGCCTTCTTAGCTTTGTATGTGAATTTTGAGCGTGATCCGGACGCGCCGCCGGTGAAGCAGGTGTTTCTGCATCCTCCTAGTGCTTCTCGCGTTGTGCTTCCTGACGGACGGTATATGGCGTATAAGGAGCAAGGTGTTTCGTCTCACAGAGCTAGGTTTTCCATCATTGCTCCTCATAGTTTTCTTTCCTCCCGGCTTGCAGGAATTCCTGGAGTTAAAGATTCTCTGCTGGAAGAGTTTGGTATTCGTTTGTTGACGTATGATATTCCTGGTTTTGGTGAGAGTGATCCTCACCCCAAGCGGAACCTGGAATCCTCGGCAACAGATATGGCATTTTTAGCGGATGCTCTCGGTGTGAACAAGTTTTGGGTTGTTGGTTATTCAAGCGGCAGTATGCATGCTTGGGCTGCACTTAGATACATTCCTGATAGGCTTGCTGGTGCGGCCATGTTTGCTCCCATGGTGAACCCATATGATCCTACGGTGACGAAGGAAGAGAGACGAAGAACTTGGAACAAATGGACACGGAGAAGAAAATTCTTGTACTTCTTAGCCCGGAGGTTTCCTAGATTTCTAGCCTTCTTCTATCAGCGAAGCTTCTTGTCTGGAAAGCATGGACAGATTGATAAGTGGCTGTCATTGTCTCTGGGAAGTAGGGATAAAGCACTGATGGAAGATCCAATTTATGAGGAATTCTGGCAAAGGGATGTGGAGGAATCAACCAGACAAAGAGATGTGAAACCTTTTGTGGAGGAAGCTGCTTTGCAGGTTACAAATTGGGGTTTCAGCCTTTCAGACCTCAAGTTGCAGAAGAGGAAACCGACTAGTGAGTTACTCAGTTGGCTGAAATCAATGTTCACTGAAACTGAGGAATATACAGGATTTCTTGGCCCTATACATATATGGCAAGGAATGGATGATAAAGTGGTTCCCCCATCAATGACTGATTTTGTGCACCGCGTGCTACCCGGAGCCGCAGTACATAAACTCCCATATGAAGGCCATTTCACTTATATATACTTTTGTCATGAATGCCACCGGCAGATATTTACTACACTCTTCGGAACCCCACAAGGTCCACTCAGCATTCCTGTAAATGTAAATCAAGCCACCCTAGAAGCCAATATTGAACAGCAGGAAGGAGTAAACGATGATGATTATGCTACAAACTAG 1455 0.4584 MEWVKMKECAREFMVGVAEMTVEFGKGCRDIVKQSLVNEDSFIVKNLGRDSYIGKRLRGPCAKLFAKLSFFNEYLPEDKDPLHAWSVIFFVFLLAFLALYVNFERDPDAPPVKQVFLHPPSASRVVLPDGRYMAYKEQGVSSHRARFSIIAPHSFLSSRLAGIPGVKDSLLEEFGIRLLTYDIPGFGESDPHPKRNLESSATDMAFLADALGVNKFWVVGYSSGSMHAWAALRYIPDRLAGAAMFAPMVNPYDPTVTKEERRRTWNKWTRRRKFLYFLARRFPRFLAFFYQRSFLSGKHGQIDKWLSLSLGSRDKALMEDPIYEEFWQRDVEESTRQRDVKPFVEEAALQVTNWGFSLSDLKLQKRKPTSELLSWLKSMFTETEEYTGFLGPIHIWQGMDDKVVPPSMTDFVHRVLPGAAVHKLPYEGHFTYIYFCHECHRQIFTTLFGTPQGPLSIPVNVNQATLEANIEQQEGVNDDDYATN 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01221 484 PANTHER HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN, EXPRESSED-RELATED 90 449 - -
Vian5g01221 484 Pfam alpha/beta hydrolase fold 165 433 IPR000073 -
Vian5g01221 484 SUPERFAMILY alpha/beta-Hydrolases 117 443 IPR029058 -
Vian5g01221 484 Gene3D alpha/beta hydrolase 106 437 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01221 Vian-Chr5 34753567 34757554 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g01221 174 256 Acyl Lipid Metabolism Gene Families AT4G02340 31.395 3.45e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01221 - - gmx:100790561 848.58