Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01218 ATGGCTGAAACATCATCTTCCTCGGAGGACCAGAATCCAAATCATATTCCCATCGAAATTATCAGCGACGACGAAATGGCTTTCATTGAAGCTGCTTTGGCCTTCGCTTCCACTCGTACTTGCTCCGCAATTCGTTCTTCTTCTTGTTCTTCGTCCCCTTCAAAATCACCCCTTCACAATAATGCTTTATCCATTACCGTCGTGTCCAAAAGAAGCTTATCGAGTGGCAGTGATATTGAGGACTTACCCCCTCGCAAGAGAAATCACACTCTTTCTGATTCCTTTCTTCGCCGCTTCAGGAACAGACGGGGTTTGTCCGTAACGGATATTACTTCTACGGAATGGTGTCCAAAACAAATGGAGTTTTCTCTGCTTCTTGGAGGGAGAAAGGTTAATCAAGCAATGAGAGCAGGCATCGCTCGCCATGCGAAGCTTGAACAAGAGGTTTTGAAACGGGTGGAAGTGAAGATCAAATATCAAGAAGATTTGTGGGCCCTGAAGTTTCTTAATTTTATAAATGGTGTTAATCAACTATTATTTGAAGGAATGACTCGTGAACTGCCAGTAATAGGCTTTGCAGAAGATATATGGATGGTGGGAGTCATTGATGAGATTCGGATGCCATTAAAACAAAATGATCATAATCCAATACTAATTGACACAAAGACTCGCGCCCGAGATACGCTTCCTGCTGAACCGCAACGAAGAAATGGAAGGCTTCAATTGATGTGCTATAAGTATTTGTGGGACAATTTGGTTGCTGATAATTTTCCATCTAATATTTTTTTCACTTATTTTGGCTTAAACCCTCAACATAATCTATGTGAAGATCTAAAAGTGACAAGTGCTGACTCTGGATTTTCTGCTTCGACTTTGGATGATGTGGTAAGATATTACAGAAATACATGTAGGATGCTGGCCCCTGCTCATGATCAGCTCTTGTTGAGATATGAGTATCAGAAAGATCATTCATTGCTTGGTGAAGATAAATTCACATATGATCATGATTGGCTAACGAATCAAATTCGCTCGTGTCTTGAGTTTTGGCTTGGAGAACAAGAAGCAACTTACCCTCCTGAAGATGAACGCTGGAAATGTGGTTACTGTCAATTTGCTCCTGTCTGTCCTGCATACAATGGTAGTAAAGAAACGATGGGACCTAAAAGCAATGATTTAAACATCAAAGAAGGCTAG 1194 0.4112 MAETSSSSEDQNPNHIPIEIISDDEMAFIEAALAFASTRTCSAIRSSSCSSSPSKSPLHNNALSITVVSKRSLSSGSDIEDLPPRKRNHTLSDSFLRRFRNRRGLSVTDITSTEWCPKQMEFSLLLGGRKVNQAMRAGIARHAKLEQEVLKRVEVKIKYQEDLWALKFLNFINGVNQLLFEGMTRELPVIGFAEDIWMVGVIDEIRMPLKQNDHNPILIDTKTRARDTLPAEPQRRNGRLQLMCYKYLWDNLVADNFPSNIFFTYFGLNPQHNLCEDLKVTSADSGFSASTLDDVVRYYRNTCRMLAPAHDQLLLRYEYQKDHSLLGEDKFTYDHDWLTNQIRSCLEFWLGEQEATYPPEDERWKCGYCQFAPVCPAYNGSKETMGPKSNDLNIKEG 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01218 397 Gene3D - 88 377 IPR011604 -
Vian5g01218 397 Pfam Exonuclease V - a 5' deoxyribonuclease 95 212 IPR019190 GO:0045145
Vian5g01218 397 Pfam Exonuclease V - a 5' deoxyribonuclease 305 375 IPR019190 GO:0045145
Vian5g01218 397 PANTHER EXONUCLEASE V 9 385 IPR019190 GO:0045145
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01218 Vian-Chr5 34692176 34696089 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01218 K17815 - gmx:100792136 640.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01218 5 34692176 34696089 Vian5g01218 5 34692176 34696089 ECH