Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01203 ATGATGAAAAACCAATGTCTTTTGTCTTTCTCAGTAGCACTGCTAGTTTCATTTTTGTATTCCACCACCACTTTAGCCCAATTATCACCAGCTTCTGCCCCTCTTAAACCAGTTCAACCTACTCCTACTCCACCAGCTGAGGCTCCTAAACAGCCATTGGTTCCCTCATTGCCACAGTCACCAAGTGATGCCACTCCCGACACTGCAGCTGTTGACATTGTTGGAATCCTGAGGCAGGCCAAGTCATTCAACATCCTTATCCGCCTCATGAAAACCACCCAATTGATCAACCAACTCAATGCACAGCTCCTCACCACTAAGTCAGGTGGCATCACCATTCTTGCACCTGATGATAGTTCCTTCTCTCAACTCAAAGCAGGCTTCCTCAACTCTCTTTCTGATGGCCAAAAGCTCGAGCTCTTACAATTCCATGTTCTGTCAGACTATGTTTCTAGCTCCAACTTTGATACTCTAACCAACCCTGTGAGAACGCTTGCAGGAGCTAAACCTGGAAAAGTGGAACTGAACGTGATAAGTTACGGAGGCAGTGTGAACATCTCAACGGGTGAGGTTAACACCACCATCACTGGCATTGTATACACAGATAAACATCTTGCTATTTACAAGGTGGGTAAAGTGCTTCTTCCTATGGACTTTTTTACTGTTGCTAAAGCACCAGCAAAGGGACCATCTTTGGCACCAGAACCTTCAGCAAAGGCTCCTAAAGCGGATAAGGAGAAGCCACTGTCTCCAGATTCCTCAGAATCATCTGAAATTAATTCCACAAGCGACAACTCTGGCACTGTGAACATCAACGTACGAGGAAAGTGGGTGTCCCTTGTTCTTGGAGGACTTATCCTGCTTGCATTGTCATCATGA 879 0.4573 MMKNQCLLSFSVALLVSFLYSTTTLAQLSPASAPLKPVQPTPTPPAEAPKQPLVPSLPQSPSDATPDTAAVDIVGILRQAKSFNILIRLMKTTQLINQLNAQLLTTKSGGITILAPDDSSFSQLKAGFLNSLSDGQKLELLQFHVLSDYVSSSNFDTLTNPVRTLAGAKPGKVELNVISYGGSVNISTGEVNTTITGIVYTDKHLAIYKVGKVLLPMDFFTVAKAPAKGPSLAPEPSAKAPKADKEKPLSPDSSESSEINSTSDNSGTVNINVRGKWVSLVLGGLILLALSS 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01203 292 SUPERFAMILY FAS1 domain 67 217 IPR036378 -
Vian5g01203 292 MobiDBLite consensus disorder prediction 35 56 - -
Vian5g01203 292 Gene3D FAS1 domain 55 216 IPR036378 -
Vian5g01203 292 MobiDBLite consensus disorder prediction 32 65 - -
Vian5g01203 292 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 7 271 IPR045003 -
Vian5g01203 292 FunFam Fasciclin-like arabinogalactan protein 11 56 216 - -
Vian5g01203 292 ProSiteProfiles FAS1/BIgH3 domain profile. 70 214 IPR000782 -
Vian5g01203 292 MobiDBLite consensus disorder prediction 228 266 - -
Vian5g01203 292 Pfam Fasciclin domain 82 216 IPR000782 -
Vian5g01203 292 SMART fasc_3 112 217 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01203 Vian-Chr5 34487695 34488573 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01203 - - gmx:100776667 435.261