Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vian5g01202 | ATGAAACAAACAACCATTTTCTCCTTATCAGTGTTCCTACTCTTTTGGTCTACCACTTTGGCCATTTCATCAGCACCTGCAGCAGCTCCAAAAGCCCCAGCAACAAAAACTCCCCATACCCCAAAGGCTGCAGCACCATCACCAAAACCATTAGTTCCCACATTACCTCAGTCTCCAGACTCCCCTGACTCTGTCCCTGATGATATCACCAGAATCCTCAAAAAGGCTAAAATGTTCTCAACTCTCATTCGCCTCCTCAAAACCACAGAAATCATCAACAACGTCAACTCACAGCTCATAACAGCCAAGACTGGGGGCATAACCATTCTAGCACCAGATGATTCTGCCTTTTCAAACCTCAAAGCTGGGTTCCTCAACTCCCTCAACGAAGGCCAGAAAATCGAACTTGTCCAGTTCCACATATTGCCACAGTTTGTCTCAAGCTCAAACTTTGATTCTCTGAGCAATCCTGTGCAGACAGTGGCAGGTAAAGATCCTGTAAGGCTTCCACTGAACGTAAATGCATTAGGTAACAGTGTCAACATTTCAACTGGAGTCGTCAATGCCACCATTCTTGGGGTAGTATACTCTGATAACAAACTTGGGATTTATCACGTTGACAAGGTGCTTCTTCCTTTGGATTTCTTTGCCACCAGTAAGGCTCCAGCTTTGGCTCCTTCATCTCTTGCAAAGGCTCCCAAAGCTGCCAAGGAAAATTCTTCTGAGGATGATCAAGGCGAAACAAAGCAGGATCAGAATAAATCTGGGGCAGTGAGTTTGGTTGGCCTTGGTGGAACAAAGTTTATGTCACTTGGCATAGCTTTGATGGCAGTGGCAACCATGTGGTGTTGA | 852 | 0.4554 | MKQTTIFSLSVFLLFWSTTLAISSAPAAAPKAPATKTPHTPKAAAPSPKPLVPTLPQSPDSPDSVPDDITRILKKAKMFSTLIRLLKTTEIINNVNSQLITAKTGGITILAPDDSAFSNLKAGFLNSLNEGQKIELVQFHILPQFVSSSNFDSLSNPVQTVAGKDPVRLPLNVNALGNSVNISTGVVNATILGVVYSDNKLGIYHVDKVLLPLDFFATSKAPALAPSSLAKAPKAAKENSSEDDQGETKQDQNKSGAVSLVGLGGTKFMSLGIALMAVATMWC | 283 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vian5g01202 | 283 | MobiDBLite | consensus disorder prediction | 28 | 67 | - | - | |
| Vian5g01202 | 283 | MobiDBLite | consensus disorder prediction | 228 | 254 | - | - | |
| Vian5g01202 | 283 | ProSiteProfiles | FAS1/BIgH3 domain profile. | 66 | 210 | IPR000782 | - | |
| Vian5g01202 | 283 | SUPERFAMILY | FAS1 domain | 49 | 213 | IPR036378 | - | |
| Vian5g01202 | 283 | MobiDBLite | consensus disorder prediction | 236 | 250 | - | - | |
| Vian5g01202 | 283 | Pfam | Fasciclin domain | 78 | 212 | IPR000782 | - | |
| Vian5g01202 | 283 | PANTHER | FASCICLIN-LIKE ARABINOGALACTAN PROTEIN | 4 | 262 | IPR045003 | - | |
| Vian5g01202 | 283 | FunFam | Fasciclin-like arabinogalactan protein 11 | 54 | 212 | - | - | |
| Vian5g01202 | 283 | Gene3D | FAS1 domain | 54 | 212 | IPR036378 | - | |
| Vian5g01202 | 283 | SMART | fasc_3 | 108 | 213 | IPR000782 | - | |
| Vian5g01202 | 283 | MobiDBLite | consensus disorder prediction | 43 | 60 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vian5g01202 | Vian-Chr5 | 34484189 | 34485040 | Dispersed/Tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vian5g01202 | - | - | pvu:PHAVU_011G074500g | 409.838 |