Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01193 ATGGTGATGATGAAGCATCCACTCTTCTCTCTCACCCTCCCACTTCTTCCAATACTACTCTTTTCTCATCCCATCATCTCTCTAGCCCAGTCACCCGCCGCCGCACCAACCGCCCCCGCCAAGGCCACCACGGCCATCACTCCGGCCCCGGTACCCTCCTCACCCCCCACAGACATCATCAGAATCCTCAAAAAGGCCGGGGGTTTCACCACCCTTATCCGTCTCCTTCAAGCCACGCAAGTTTCCAACCAAATAAACTCCCAACTCCTTACCACAAACGGCGGCTTAACCTTATTTGCACCAAACGACAATGCCTTTTCAAGCCTCAAACCTGGCTTTCTCAACTCCCTCAACGACCAACAAAAGAACGAGCTCATCCAGTTCCACTTGCTACCCACATTCGTTTCCGTTTCAAACTTTGACACTCTCAGCAACCCTGTGAGAACACAGGCCGGTGAAAACCCTGATAGGTTGGCACTGAACATAACAAGCTCAGGAGGGAACCAAGTGAACATGACCACGGGGATCGTCAACGTTACATTAGCTCCAGCGCCAGAAAAGCCTAAGGGGTCTAAGAAGAAATCTGCAGACAGCACTGGAACTCCTGCTGATGATGCTGAATCTGCTGCTATCAGTGTGAAACAGCAGCATGTGATATGGGTTGCTGTTGCTGCACTTTCAGTTGCAGCAGTTTCGTGGTGA 702 0.5142 MVMMKHPLFSLTLPLLPILLFSHPIISLAQSPAAAPTAPAKATTAITPAPVPSSPPTDIIRILKKAGGFTTLIRLLQATQVSNQINSQLLTTNGGLTLFAPNDNAFSSLKPGFLNSLNDQQKNELIQFHLLPTFVSVSNFDTLSNPVRTQAGENPDRLALNITSSGGNQVNMTTGIVNVTLAPAPEKPKGSKKKSADSTGTPADDAESAAISVKQQHVIWVAVAALSVAAVSW 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01193 233 SUPERFAMILY FAS1 domain 42 172 IPR036378 -
Vian5g01193 233 MobiDBLite consensus disorder prediction 181 208 - -
Vian5g01193 233 ProSiteProfiles FAS1/BIgH3 domain profile. 56 184 IPR000782 -
Vian5g01193 233 Gene3D FAS1 domain 33 199 IPR036378 -
Vian5g01193 233 SMART fasc_3 97 186 IPR000782 -
Vian5g01193 233 Pfam Fasciclin domain 68 174 IPR000782 -
Vian5g01193 233 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 12 181 IPR045003 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01193 Vian-Chr5 34442277 34443074 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01193 - - gmx:100791643 314.694