Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01191 ATGAGAGCGACACGTATTCTGTTTGTTTTGCTTTGGTTCTTCTGCGTTTATTCTCCTGCTGCGTTTTGCGCAAATGTCACGTATGACCACAGAACATTGGTCATTGATGGCAAGCGCCGAGTCTTGGTCTCTGGTTCTATTCATTACCCTCGTAGCACTCCAGAGATTTGGCCAGACCTCATTCAGAAATCCAAAGATGGAGGACTTGATGTCATTGAGACTTATGTTTTCTGGAACTTACATGAACCAGTTCAGGGCCAGTATAATTTTGAAGGTAGGGCAGATTTGGTTAAATTTGTGAAGACAGTAGCAGCAGCAGGCCTATATGTGCATCTCCGGATTGGTCCATACGCATGTGCTGAATGGAACTACGGTGGTTTCCCTCTTTGGCTACATTTTATTCCGGGAATTCAGTTCCGAACTGATAACAAACCATTCGAGGCAGAAATGCAGCGGTTCACTGCTAAGATCGTGGATATGATGAAGCAAGAGAACCTCTATGCATCACAGGGAGGACCAATTATTTTGTCTCAGGTCGAAAATGAATATGGAAACATTGATGCGGCCTATGGTTCTGCTGCTAAATCCTACATCAAATGGGCAGCATCAATGGCAACATCTCTTGATACAGGGGTTCCTTGGGTAATGTGCCAACAGGCAGATGCTCCTGACCCAATTATTAACACATGCAATGGATTTTACTGCGATCAATTCAAACCAAACTCTAACTCGAAACCAAAAATGTGGACTGAGAACTGGAGTGGATGGTTTCTTTCGTTTGGTGGTGCTGTGCCTTACAGACCAGTGGAAGATCTTGCTTTTGCTGTGGCACGCTTTTACCAGCGAGGTGGAACTTTTCAGAATTACTACATGTACCATGGAGGGACTAATTTTGGCCGAACTACCGGTGGACCTTTCATTTCTACTAGTTATGATTATGATGCTCCAATTGATGAGTATGGAATTGTTAGGCAGCCAAAGTGGGGGCACCTTAAAGATGTGCATAAGGCCATAAAGCTTTGTGAAGAAGCACTGATAGCGACTGATCCAACAATTACAACTCCTGGACCAAATATAGAGTTACTATTCAAAATCCAGGCTGCAGTTTACAAGACGGGATCTGCATGTGCAGCCTTCCTTGCCAACATTGCCACATCTGATGCAACAGTATCCTTTAACGGAAATTCATATCACTTGCCTGCATGGTCTGTGAGCATCTTACCAGACTGCAAGAATGTAGTGCTCAATACTGCAAAGATTAATTCTGCATCAATGATTTCAAGCTTCAGAACTGAATCCTTAAAAGAAGAGGTTGGTTCTGGCTCAGGATGGAGTTGGATTAGTGAACCCGTCGGTATTTCAAAGGATGATTCATTCTCCAAATTTGGATTACTGGAGCAAATAAATACAACCGCTGATAAAAGTGATTATTTGTGGTACTCGTTAAGAATTGATATGGAAGATGATGCTGGTTCTCAAACTGTCCTTCACATTGAGTCCCTTGGTCACGCCCTACATGCTTTCATAAATGGGAAGCTTGCAGGGAGTGGAACTGGCAACAGTAACAAAGCTAAGGTCGCAGTAGACATCCCCATCCAACTAGTGGCTGGGAAGAACATAATTGATCTTCTGAGTTTAACAGTGGGACTTCAGAACTACGGAGCCTTTTTTGACACATGGGGTGCGGGGATCACTGGTCCCGTGATATTGAAAGGTTTGAAGAATGGAAGCACTATTGATCTCTCCTCCCAACAGTGGACATATCAGGTTGGCCTTAAATATGAAGATTTAGGTCCATCAAGTGGAAGTTCTGGACAGTGGAATTCACAATCTGATTTACCTATAAATCAACCCTTGACTTGGTACAAGACAAACTTTGTTGCTCCCTCGGGAAGTGATCCGGTTGCTATTGACTTCACGGGGATGGGAAAAGGTGAAGCTTGGGTGAACGGACAGAGCATTGGGCGATACTGGCCTACATTTGTCTCCCCAAATGGCGGTTGTGCTGACTCTTGCAATTATAGAGGGGCCTATAGTTCATCCAAATGTCTCAAGAACTGTGGGAAACCATCACAGACGTTATACCATGTACCACGATCATGGTTACATCCAGATACCAACACACTTGTATTGTTTGAGGAAAGTGGAGGTGACCCTACGCAAATCTCTTTTGCTACAAAACAGATAGGAAGCGTGTGTTCACATGTATCTGAATCTCACCCTCCACCTGTAGACTTGTGGAATTCAGAAACAAAAGTAGGGCCTGTACTGTCACTGGAGTGCCCTTATCCTAATCAGTTGATCTCTTCCATTGAATTTGCAAGTTTTGGAACGCCTTATGGGACTTGTGGAAATTTCAAACATGGACGGTGCAGAAGTAATAAGGCTCTATCCATTGTTCAGAAGGCCTGCATTGGATCAAATAGTTGTAGCATTGGATTATCACTTAATACATTTGGAGATCCGTGTAAAGGAGTAGCAAAGAGTTTAGCTGTTGAAGCTTCTTGTGCATAG 2514 0.4352 MRATRILFVLLWFFCVYSPAAFCANVTYDHRTLVIDGKRRVLVSGSIHYPRSTPEIWPDLIQKSKDGGLDVIETYVFWNLHEPVQGQYNFEGRADLVKFVKTVAAAGLYVHLRIGPYACAEWNYGGFPLWLHFIPGIQFRTDNKPFEAEMQRFTAKIVDMMKQENLYASQGGPIILSQVENEYGNIDAAYGSAAKSYIKWAASMATSLDTGVPWVMCQQADAPDPIINTCNGFYCDQFKPNSNSKPKMWTENWSGWFLSFGGAVPYRPVEDLAFAVARFYQRGGTFQNYYMYHGGTNFGRTTGGPFISTSYDYDAPIDEYGIVRQPKWGHLKDVHKAIKLCEEALIATDPTITTPGPNIELLFKIQAAVYKTGSACAAFLANIATSDATVSFNGNSYHLPAWSVSILPDCKNVVLNTAKINSASMISSFRTESLKEEVGSGSGWSWISEPVGISKDDSFSKFGLLEQINTTADKSDYLWYSLRIDMEDDAGSQTVLHIESLGHALHAFINGKLAGSGTGNSNKAKVAVDIPIQLVAGKNIIDLLSLTVGLQNYGAFFDTWGAGITGPVILKGLKNGSTIDLSSQQWTYQVGLKYEDLGPSSGSSGQWNSQSDLPINQPLTWYKTNFVAPSGSDPVAIDFTGMGKGEAWVNGQSIGRYWPTFVSPNGGCADSCNYRGAYSSSKCLKNCGKPSQTLYHVPRSWLHPDTNTLVLFEESGGDPTQISFATKQIGSVCSHVSESHPPPVDLWNSETKVGPVLSLECPYPNQLISSIEFASFGTPYGTCGNFKHGRCRSNKALSIVQKACIGSNSCSIGLSLNTFGDPCKGVAKSLAVEASCA 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01191 837 Gene3D Glycosidases 20 341 - -
Vian5g01191 837 ProSiteProfiles SUEL-type lectin domain profile. 751 837 IPR000922 GO:0030246
Vian5g01191 837 FunFam Beta-galactosidase 21 341 - -
Vian5g01191 837 Pfam Beta-sandwich domain in beta galactosidase 364 420 IPR041392 -
Vian5g01191 837 FunFam Beta-galactosidase 290 421 - -
Vian5g01191 837 Pfam Glycosyl hydrolases family 35 33 337 IPR031330 -
Vian5g01191 837 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 171 183 IPR019801 GO:0004553|GO:0005975
Vian5g01191 837 Gene3D - 421 571 - -
Vian5g01191 837 PANTHER BETA-GALACTOSIDASE RELATED 20 768 IPR001944 GO:0004553|GO:0005975
Vian5g01191 837 PRINTS Glycosyl hydrolase family 35 signature 57 75 IPR001944 GO:0004553|GO:0005975
Vian5g01191 837 PRINTS Glycosyl hydrolase family 35 signature 285 300 IPR001944 GO:0004553|GO:0005975
Vian5g01191 837 PRINTS Glycosyl hydrolase family 35 signature 305 321 IPR001944 GO:0004553|GO:0005975
Vian5g01191 837 PRINTS Glycosyl hydrolase family 35 signature 644 660 IPR001944 GO:0004553|GO:0005975
Vian5g01191 837 PRINTS Glycosyl hydrolase family 35 signature 112 131 IPR001944 GO:0004553|GO:0005975
Vian5g01191 837 PRINTS Glycosyl hydrolase family 35 signature 169 184 IPR001944 GO:0004553|GO:0005975
Vian5g01191 837 PRINTS Glycosyl hydrolase family 35 signature 248 263 IPR001944 GO:0004553|GO:0005975
Vian5g01191 837 PRINTS Glycosyl hydrolase family 35 signature 36 53 IPR001944 GO:0004553|GO:0005975
Vian5g01191 837 PRINTS Glycosyl hydrolase family 35 signature 617 631 IPR001944 GO:0004553|GO:0005975
Vian5g01191 837 Pfam Galactose binding lectin domain 759 836 IPR000922 GO:0030246
Vian5g01191 837 SUPERFAMILY Galactose-binding domain-like 404 573 IPR008979 -
Vian5g01191 837 Gene3D - 573 733 - -
Vian5g01191 837 FunFam Beta-galactosidase 593 733 - -
Vian5g01191 837 Gene3D - 748 837 IPR043159 -
Vian5g01191 837 SUPERFAMILY Galactose-binding domain-like 586 750 IPR008979 -
Vian5g01191 837 SUPERFAMILY (Trans)glycosidases 26 342 IPR017853 -
Vian5g01191 837 FunFam Beta-galactosidase 422 572 - -
Vian5g01191 837 CDD Gal_Rha_Lectin_BGal 749 836 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01191 Vian-Chr5 34416871 34422465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g01191 20 694 Glycoside Hydrolase AT2G28470 76.385 0.0 1082
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01191 - - gmx:100793198 1621.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01191 5 34416871 34422465 Vian5g01191 5 34416871 34422465 ECH