Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01190 ATGACCATGCAAAAGCAATTTCTCTTCTCCTTCTCACTAGCACTGCTAGTTTCATTTTTGTATTTCACCAACACTTCAGCTCAGTTATCACCGGCTGCTTCCCCTCTAAAACCACCCCAACCTACCCCTACACCACCAGCTGCAGCCCCTAAACCATTGGTTCCCTCGTTGCCAGAGTCACCAAGTGATGCAACCCCTGATACTGCAGCAGCTGTTGACATTGTTGGAATCCTGAGGCAGGCTAAGTCATTCAACATCCTTATCCGTCTCATGAAAACCACTCAATTGATCAACCAACTCAATGCACAACTCCTCACTACTAAATCAGGTGGCATCACCATTCTTGCACCTGATGACAGTTCCTTCTCTGAACTCAAAGCAGGCTTCCTCAACTCTCTGTCTGATGGCCAAAAGCTCGAGCTCTTACAGTTCCATGTTCTTTCAGAGTATGTGTCTAGCTCCAACTTTGATACTCTTACCAACCCTGTGAGAACACTTGCAGGAGCTAAACCTGGAAAGGTGGAACTGAATGTGATAAGTTACGGAGGAAGTGTGAACATTTCAACAGGAGAGGTCAACACCACCATCACTGGCATTGTATACACAGATAAGCATCTTGCTATTTATAAGGTGGGAAAGGTGCTTCTTCCTATGGACTTCTTTACAGTGGCCAAGGCACCTGCAAAGTCACCCTCTTTGGCACCAGAACCATCTGCAAAGGCTCCTAAAGCAGATAAGGAGAATTCGCTGTCCCCAGACTCCTCAGAATCATCACAGATTAATTCCTCAAAGGATAACTCTGGCACAGTGAAAATCAATGTGTATGGAAAGTGGCTGTCCCTTGTTCTTGGAGTAGTTCTCGTGACTGTTTTCTCATCGTAA 882 0.4569 MTMQKQFLFSFSLALLVSFLYFTNTSAQLSPAASPLKPPQPTPTPPAAAPKPLVPSLPESPSDATPDTAAAVDIVGILRQAKSFNILIRLMKTTQLINQLNAQLLTTKSGGITILAPDDSSFSELKAGFLNSLSDGQKLELLQFHVLSEYVSSSNFDTLTNPVRTLAGAKPGKVELNVISYGGSVNISTGEVNTTITGIVYTDKHLAIYKVGKVLLPMDFFTVAKAPAKSPSLAPEPSAKAPKADKENSLSPDSSESSQINSSKDNSGTVKINVYGKWLSLVLGVVLVTVFSS 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01190 293 FunFam Fasciclin-like arabinogalactan protein 11 56 217 - -
Vian5g01190 293 Gene3D FAS1 domain 57 217 IPR036378 -
Vian5g01190 293 SUPERFAMILY FAS1 domain 70 218 IPR036378 -
Vian5g01190 293 Pfam Fasciclin domain 83 217 IPR000782 -
Vian5g01190 293 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 8 274 IPR045003 -
Vian5g01190 293 MobiDBLite consensus disorder prediction 31 65 - -
Vian5g01190 293 SMART fasc_3 113 218 IPR000782 -
Vian5g01190 293 ProSiteProfiles FAS1/BIgH3 domain profile. 71 215 IPR000782 -
Vian5g01190 293 MobiDBLite consensus disorder prediction 34 59 - -
Vian5g01190 293 MobiDBLite consensus disorder prediction 229 265 - -
Vian5g01190 293 MobiDBLite consensus disorder prediction 251 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01190 Vian-Chr5 34413233 34414114 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01190 - - gmx:100790242 406.757