Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01189 ATGAAGATGGGTGGAAGAAAGTGGAGCATCTTGGTGGCCATCTTCATCTTGCTTATGGCCATGGAAGCTGCCATTGTTCAAGGTCAAGGCAATGGCAATGACAATGGTAATGGTAATGGAAACGGTAAAGGAAGTGATAAGAAAGAGAAGGATAAGGAAAAGAAGGAGAAAAAGCAAAAAGAGAAAAAGCCAAAGAAGGAACGTGATGAAGCCTCGGATTATGACAAGCTGTCAGCACTGCCATCAGGTCAAGAACGAGGGTTCTGCAGAACAAACACCACCTGTGAGTTTAAGACTATAGTGTGTCCAACCGAGTGCGCAAAGAGGAAGCCCAAGAAGAACAAGAAGTCGAAGGCATGCTTCATTGACTGTAGCAGCAGCAAATGTGAAGCCACCTGCAAGGTGAGGAAAGCTAACTGTGATGGGTATGGATCTCTGTGTTATGATCCTCGCTTTGTGGGTGGTGATGGTGTGATGTTCTACTTCCACGGTGCCAAAGGAGGAAACTTTGCCATTGTTTCTGATGATGAGTTCCAAATCAATGCTCACTTCATTGGTACTCGACCACAAGGAAGGACTCGTGACTACACATGGGTGCAAGCACTTGCTGTCATGTTTGATTCACACACTCTTTTGATTGCAGCCAATAGAGTATCTCATTGGGATGACACCGTTGATTCTCTCACAATAAAGTGGGATGGAGAACTAGTCAATGTTCCCATCGATGGAGAAGCTGAATGGAGGGCCAATGGTAATGAAAGAGAAGTGGTTGTGGAGAGAACCGATGAGACCAACACTGTGAGAGTGATGGTTTCGGGTTTGGTTGAGATGGACATAAGTGTGAAGCCTATTGGAGAGAAAGAAAACAAGGTTCACAATTACCAGTTGCCACAAGATGATTCTTTTGCCCATTTGGAGACACAGTTCAGGTTTAAGAAAAGTACAGATCATTTTGAAGGAGTTTTGGGACAGACTTACAGGCCAGGGTATGTTAGCCCTGTCAAGAGAGGGGTTCCTATGCCAATGATGGGTGGGGAGAACAAGTACGAGACTCCCTCTCTCTTTTCAACATCATGCAAACGATGCATGTTCCAGAGGCCATCTGAAATAGCAAACACAAAAGGATTAGTTGCTAAGTATTGA 1143 0.4471 MKMGGRKWSILVAIFILLMAMEAAIVQGQGNGNDNGNGNGNGKGSDKKEKDKEKKEKKQKEKKPKKERDEASDYDKLSALPSGQERGFCRTNTTCEFKTIVCPTECAKRKPKKNKKSKACFIDCSSSKCEATCKVRKANCDGYGSLCYDPRFVGGDGVMFYFHGAKGGNFAIVSDDEFQINAHFIGTRPQGRTRDYTWVQALAVMFDSHTLLIAANRVSHWDDTVDSLTIKWDGELVNVPIDGEAEWRANGNEREVVVERTDETNTVRVMVSGLVEMDISVKPIGEKENKVHNYQLPQDDSFAHLETQFRFKKSTDHFEGVLGQTYRPGYVSPVKRGVPMPMMGGENKYETPSLFSTSCKRCMFQRPSEIANTKGLVAKY 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01189 380 Pfam Root cap 308 364 IPR009646 -
Vian5g01189 380 PANTHER ROOT CAP DOMAIN-CONTAINING PROTEIN 6 369 - -
Vian5g01189 380 MobiDBLite consensus disorder prediction 43 75 - -
Vian5g01189 380 MobiDBLite consensus disorder prediction 30 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01189 Vian-Chr5 34410114 34411429 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01189 - - gmx:100789697 607.446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01189 5 34410114 34411429 Vian5g01189 5 34410114 34411429 ECH