Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01163 ATGAGTTATATTAGGAGGGCATGCAGTGCCAAAAACACAAGGGTTACCCTTTTCAACGGCATCAAATTTGGCTTTCATTGGTTAGAGGATATTGAATCATCTAAAATGGGTTTTGGTCGAACTTCGACCTCGAGAAGTGGAGATTACTTGGAAGGGATGCTTAATGACTATGTTGGAGGAAGAAACAAAGTGAAGGCTCAGAAAGTTTCCTCCACAAAGTTTGTTGCAGCACTCACTTGTCTTCAGTTTTTCTTTGCAGTTTATGCAACATTCTTATTGTATTACATGGGGCCTTCCATTGATTTAAGAACCAAACCAGAGTTCACATGGGCTACCAAAATTGCCCAACAGTGGAAACAACTTATGATCACACCCCACGTTATTGGCCGCTACCAAGAAGCTGCTTCCTCTCTCGTCATGGAGGGTGTTCTTCCCACAAGTCCGTCACAGGTGTGTGAGAATGAGAAGATAGACTTCCAGCAAAAGAAGTCCAATGATGTCCAAATGATCAAGTTAAAGAGAGATTTATACGATGAGGTGTTGAACTTCCAAAGCAAAACATTTGGCACTGAGACTCTTCAGGAGCTTATGGCAATGAAATCTAAATGGGACTTGAAGGGTCCAAACAGCCCAAAAATCACTGTATTGCTGAACCACTTCAAGAGAAAGACACTCTGTGCTCAGCTTGATTCTTTGCTCCAACAGACCCTTCCTTTCCATCATGCTTGGGTTCTTTCATTTGGGAGCCCCAATGAGGCCTCATTGAGGAGAATTGTGGAGACCTATAATGACTCAAGAATCAGCTTCATAAGCTCAAGCTATGATTTCAAGTACTATGGAAGGTTCCAAATGGCTCTTCAGACTGATGCTGATCTTGTGTACGTTATTGATGATGACATGATTCCTGGAAGGAAGATGTTGCAGATTTTGGCGCACGTGGCTGGGACAGAAAAATACAAGAATTCTGTTTTGGGGAGTATTGGAAGGATTTTGCCTTTTAGACAGAAGGATTTCACGTTTCCAAGTTACAGAAAATTTCGATCTAAGGAAGCAGGGTTGTATTTACCCGATCCTGCTTACGATATCACAGTTGATAAAATTGTGCAGGTGGATTTTCTATCTAGTTCATGGTTTCTCTCTGCTGATCTTGTTAAGACACTGTTCATTGAGACACCTTTTACCTTCTCAACTGGTGAAGATCTGCACCTCAGCTATCAGCTTCAGAAGTACAAAAATGCTGGTTCCTTTGTTCTTCCAGTAGACCCTAAGGACAAGGAAACTTGGGGAGATAGTGAACACAGGCTTGCATATGTATCTGAAACCACAGTGATTTTCAAGGACATAGTTCAGGTCAGAGATGATCAATGGTGGAAAGCACTATCCACTGGTTATGTGACTCAATGGGCTGCAATGTACCCACAAAAAGTTGATGCACTCTTCTATGCTCACTCGGTTGATGAAGTGAAAGTGCTGGCACCACTTCTTGAAAAATTTAGGTCCACAGTTGGCAAGAAGGCCTACATTGTTGTCTCTGGAGGCAGTTTCTGCACTTGTGAAGATGCTGCAACAGCTCTCAAATGGCCTACAATGGTCTGCAAAGAACGTCGATTCAAGATTTTTGATTTGGCCATTGGATCACTTTCTGGGGTATCAGACTCAGAGGCACCAGTGATACACGCAGTGTATACCAGCATGAAGGGTTTGATCAAAATTCACAACCCCAGTGTAGTGATCACTGTTGCTGACATTAACCCTCATGTGAGAAAAGCTCTTAAGATGGCCTCAGAAACCAACTCAAACGCTACCACATTGGTTCTTTTACCCAGGGCATCAGTGTCTCAAGTTCTCTGGATGGCTGATCTGCGTTCAACAGCATTACCAAATTGGAATCGGATGAGGATTTCTGTGAACATCATCACCCAAAACAGAGCCAATTCACTAACAAGGCTTCTGAAATCTCTAAGCAATGCCTACTATCTTGGAGATGAAATTCCCATTACCTTCAACATGGATAGCAGGGTAGATGAGGAAACTATAAGAGTAGTAGGTTCATTTGAGTGGCCTCATGGACCCAAAACCCTGAGAAGGAGAATAATCCAAGGTGGTCTCATTCGTGCTGTGAGTGAAAGTTGGTATCCATCATCAGATGATGACTTTGGTCTCCTACTGGAAGATGACATTGAAGTTTCCCCTTACTACTACCTATGGATCAAATATGCACTCATGGCTTACCACTATGACCCTCAAGTTTCTCTCCCAGAGCTCTCCTCCATCTCCCTCTACACTCCAAAGCTCGTTGAAGTTGTCAAAGAGAGACCAAAATGGAATGCCACAGAATTCTTCAAACACATTCACCCCAACACACCTTACCTTCACCAATTACCATGCAGCTGGGGGGCAGTGTTCTTCCCCAAGCATTGGAGAGAGTTCTATGTATACATGAACATGAGGTTCACTGAGGATGCCAAATCCAACCCTGTTCAAATTCCAAAATCTAGAACAAATGGATGGCAGGCTTCATGGAAGAAGTTCCTGATAGACATGATGTACCTGAGAGGGTATGTCAGTCTCTACCCAAATTTCCCTCAACAATCAAGCTTTTCAACCAACCATATGGAGCCAGGGGCACATATCAGTGCAAAAGACAACGTTGTTAAGCATAACATACAGGACTTTGAGGTGCCACTACTGAAAGAAGACTTCAGAAACTTGTTGCCAGCAATGAAGATGCCTCCAGCATCAAAGCTCCCATCTTTAAACCTCTTCAATCAACCAGTTTCTCTGAAGGGTCTCAAAGCTGCTGGAGCTAAGCTGGGACAGGATGTGCTAAGATGCAACAATGTCACTGAGGTTGTGGCTGTTGATCAAGACACGGGTCTACCTCGTACCTGCTCCAAATTCTGA 2904 0.4332 MSYIRRACSAKNTRVTLFNGIKFGFHWLEDIESSKMGFGRTSTSRSGDYLEGMLNDYVGGRNKVKAQKVSSTKFVAALTCLQFFFAVYATFLLYYMGPSIDLRTKPEFTWATKIAQQWKQLMITPHVIGRYQEAASSLVMEGVLPTSPSQVCENEKIDFQQKKSNDVQMIKLKRDLYDEVLNFQSKTFGTETLQELMAMKSKWDLKGPNSPKITVLLNHFKRKTLCAQLDSLLQQTLPFHHAWVLSFGSPNEASLRRIVETYNDSRISFISSSYDFKYYGRFQMALQTDADLVYVIDDDMIPGRKMLQILAHVAGTEKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDITVDKIVQVDFLSSSWFLSADLVKTLFIETPFTFSTGEDLHLSYQLQKYKNAGSFVLPVDPKDKETWGDSEHRLAYVSETTVIFKDIVQVRDDQWWKALSTGYVTQWAAMYPQKVDALFYAHSVDEVKVLAPLLEKFRSTVGKKAYIVVSGGSFCTCEDAATALKWPTMVCKERRFKIFDLAIGSLSGVSDSEAPVIHAVYTSMKGLIKIHNPSVVITVADINPHVRKALKMASETNSNATTLVLLPRASVSQVLWMADLRSTALPNWNRMRISVNIITQNRANSLTRLLKSLSNAYYLGDEIPITFNMDSRVDEETIRVVGSFEWPHGPKTLRRRIIQGGLIRAVSESWYPSSDDDFGLLLEDDIEVSPYYYLWIKYALMAYHYDPQVSLPELSSISLYTPKLVEVVKERPKWNATEFFKHIHPNTPYLHQLPCSWGAVFFPKHWREFYVYMNMRFTEDAKSNPVQIPKSRTNGWQASWKKFLIDMMYLRGYVSLYPNFPQQSSFSTNHMEPGAHISAKDNVVKHNIQDFEVPLLKEDFRNLLPAMKMPPASKLPSLNLFNQPVSLKGLKAAGAKLGQDVLRCNNVTEVVAVDQDTGLPRTCSKF 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01163 967 CDD Glyco_tranf_GTA_type 223 314 - -
Vian5g01163 967 PANTHER OSJNBA0004B13.7 PROTEIN 315 958 - -
Vian5g01163 967 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 633 882 IPR029044 -
Vian5g01163 967 SUPERFAMILY Nucleotide-diphospho-sugar transferases 631 822 IPR029044 -
Vian5g01163 967 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 195 420 IPR029044 -
Vian5g01163 967 SUPERFAMILY Nucleotide-diphospho-sugar transferases 211 411 IPR029044 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01163 - - gsj:114374559 1781.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01163 5 34096019 34100154 Vian5g01163 5 34096019 34100154 ECH