Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01150 ATGGACCCTCTAGATTTCTCATCATCGCTTCACTCTCCTTCTCAGATTATTAAAAAGAAAATTACTGGGCGGCAAAAGAGACAGGAACTTGAAAGAGAGGTTGCTATGCTTCAAAGGCTGTTGGAGAAAGAAGAAAAGTTTCATGAGATTTTGGAGATGGTGCATAATAGACCAAATGGATCGGCTATATCAATTCCCAATTTTCTTCCACCCAAGATGAGAGAACTGTTAGGAGAGCTAGTGATGGTTGAGAGTGAAATTGCAAGACTAGAAAGCCAAATAAGCCAACTTCAAGCTGGTTTGAAACATGAACAAGAAGTGACCAAGGAATCAAAGTCTAAAACGTGGAATCAAGGGAATTTGAGTAATTCTAACAATCACTTATCAACTTCTCCGGTTCCAAATCCTAGTCCTATTCGCAGAAGTGTTCAAGAAAGGATGGCCTTTGAAACAAAGGCGTTGCATTTCATAAGCAAAGCTATAAAGGGTGATTACAATCTCAGTGATTTCAGTCTAAATGACAGAGCTTTTCTGAAAACTTCCGTAGAACAGAAAGAAAATAAGTTCCAAGAAGATGTGAAATTTCATGAAAGAATTCCAAGAAAAAATGGGACAGTAAAACCTCCCTCACCTATGCGTGACCCACGTCATCCATCACCCAAGCTGCGGGAACGCAATCCAGAGATGTACTTGGATCTTCCAACTAGATCACTGTTGGATCCACTTCTGTCAGAAGAGAATGATCTCAAGTGGCAACCCAACAAGCTATCTGAGAGCATCATGAAGTGTTTGAATTTCATATATGTAAGACTACTCAGAACTTCAAGAGCAATGGAATTGGAGAAATCAGGGCCAATTTCAAGGTCTGTGCACTCTTCTTTAAGTTCAAGAAGCTTCAGGGTGGATACTGGGTCAATTCCAAAACCAAGCCTCTTGTTGCAAAAGGAATCTAGGCAGCAAGACCCTTATGGTATCTTTAACACAGAAGAGTCCATTCCAAGGGACATTGGTCCTTACAAGAACCTGGTTATATTCACTTCCAGCTCTATGGATCCCAAGTTTATCTCAAGTCCATCCTCTATACCATTACTTAGGAAGCTAAGGATCTTGATGAGCAATCTTCAAACAGTTGACTTGAAAAGCCTCACAAACCAACAGAAACTAGCATTCTGGATCAACGTGTACAATGCTTGTATCATGCATGGATTTATCCAATATGGAGTGCCATCCACACCAGAAAAACTACTTGCACTGATGAACAAGGCAACCCTCAATGTAGGAGGCAACCTAATAAATGCTCAAGCAATAGAGCATTTCATCTTGAGGAAACGAGATATTTCTAGCATGAAAGAGGTTCAGCATAAGGGTGAGTGGGAAGAGAAAGAATCAGTTGTTCGTGAACTTTATGGACTTGAGTCTGTTGATCCTAATGTCACATTTGCTCTGTGTTGTGGAACTCGTTCTTCTCCTTGTGTGAGGATATACACGGCAGATGGAATTACAAGTGAATTGGAGAAATCAAAACTAGACTATCTTCAAGCTTCAATTCTAGCCACTAGCACCAAAAGAATAGGATTTCCAGAGCTTCTTCTCATGAACATGCTTGATTTTGCTGCAGATATAGAATCATTGGTGGAGTGGGTATGTAGCCAGTTACCCACATCAGGCACTCTAAGGAAATCAATGGTGGATTGCTTCAGAGGCCACAATAATACTAATTCTGTGAAGATTTCTACCATTGTTGAAAAGATACCCTATGACTATGAATTCCAGTATTTGTTGACAATATAA 1791 0.4009 MDPLDFSSSLHSPSQIIKKKITGRQKRQELEREVAMLQRLLEKEEKFHEILEMVHNRPNGSAISIPNFLPPKMRELLGELVMVESEIARLESQISQLQAGLKHEQEVTKESKSKTWNQGNLSNSNNHLSTSPVPNPSPIRRSVQERMAFETKALHFISKAIKGDYNLSDFSLNDRAFLKTSVEQKENKFQEDVKFHERIPRKNGTVKPPSPMRDPRHPSPKLRERNPEMYLDLPTRSLLDPLLSEENDLKWQPNKLSESIMKCLNFIYVRLLRTSRAMELEKSGPISRSVHSSLSSRSFRVDTGSIPKPSLLLQKESRQQDPYGIFNTEESIPRDIGPYKNLVIFTSSSMDPKFISSPSSIPLLRKLRILMSNLQTVDLKSLTNQQKLAFWINVYNACIMHGFIQYGVPSTPEKLLALMNKATLNVGGNLINAQAIEHFILRKRDISSMKEVQHKGEWEEKESVVRELYGLESVDPNVTFALCCGTRSSPCVRIYTADGITSELEKSKLDYLQASILATSTKRIGFPELLLMNMLDFAADIESLVEWVCSQLPTSGTLRKSMVDCFRGHNNTNSVKISTIVEKIPYDYEFQYLLTI 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01150 596 Pfam Protein of unknown function, DUF547 380 512 IPR006869 -
Vian5g01150 596 Coils Coil 27 47 - -
Vian5g01150 596 MobiDBLite consensus disorder prediction 201 224 - -
Vian5g01150 596 PANTHER EXPRESSED PROTEIN 18 595 - -
Vian5g01150 596 Coils Coil 73 107 - -
Vian5g01150 596 MobiDBLite consensus disorder prediction 105 139 - -
Vian5g01150 596 MobiDBLite consensus disorder prediction 112 138 - -
Vian5g01150 596 Pfam Leucine-zipper of ternary complex factor MIP1 23 104 IPR025757 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01150 Vian-Chr5 33726332 33731471 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01150 - - gmx:100809848 1048.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01150 5 33726332 33731471 Vian5g01150 5 33726332 33731471 ECH