Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01143 ATGCAGGATGAAGCAACTGTGGTGGGATTTGAAGTTCCAAAATCACCTGAATCCAGTTACAACAATGTCTACCCTGGAAATGAAGATGAGGCAAGGGATCCGCCTATGGTGCCTTCACATTTGCAACACACTTTGCTCAATTATCCTGCTACCAGAGACACTGCAGGAACAGTTCCATTGCCTCAGAACGTGATTCTAAATCATCTTTACATCGAGAATAGAGAGTCCCCAAGATCTGTGGTGGCTTTGGGATTCACTCATCGTTTCCGTTCTAAATATGTTACAGTCGTCCTTTACAAACCAGTCCAAAGAAGGGGAAATACAGGCATTTAA 333 0.4354 MQDEATVVGFEVPKSPESSYNNVYPGNEDEARDPPMVPSHLQHTLLNYPATRDTAGTVPLPQNVILNHLYIENRESPRSVVALGFTHRFRSKYVTVVLYKPVQRRGNTGI 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01143 110 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1 2 104 IPR043554 -
Vian5g01143 110 Pfam 5'-AMP-activated protein kinase beta subunit, interaction domain 31 101 IPR006828 GO:0005515
Vian5g01143 110 SMART AMPKBI_2 13 102 IPR006828 GO:0005515
Vian5g01143 110 SUPERFAMILY AMPKBI-like 5 102 IPR037256 -
Vian5g01143 110 MobiDBLite consensus disorder prediction 1 35 - -
Vian5g01143 110 Gene3D - 7 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01143 Vian-Chr5 33505079 33505411 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01143 - - gmx:102661902 217.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01143 5 33505079 33505411 Vian5g01143 5 33505079 33505411 ECH