Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01136 ATGGGCGCGAAAAAGAAGTCAGGTGGTGGAAACGGCAACAAGGAGAACGAGGACGGCACCACAACCGTCGTTTTGAAGATCGACTTCCACTGCGACGGTTGCGCTTCCAAAATCACTCGCCACCTCCGTTCTCTCCAAGGTGTGGAGACGGTGCAGGCGGATGGCGACGCCGGGAAGGTAACAGTGACCGGGAAAATTGACGCCGTGAAGGTGAGGGACAACCTGGCGGAGAAGATGAAGAAGAAGGTGGAAATCGTCTCTCCGCAGCCCAAGAAGGAGAAGGAGGAGAGTAAAGACGCTAAAGCCAACAACAAAACCCAGGACAAGAAGAACAAGGACAAAGAGGTGACTACCGCGGTTCTGAAGATGGCACTGCATTGCCAGGGTTGTTTGGACAGGATTGGCAAGACTGTGCTGAAAACCAAAGGAGTGAAAGAGATGGCTATAGACAAGGAAAAGGAAACGGTGACTGTGAAAGGGACAATGGATGTTAAGGCTCTGGCGGAGAATCTAATGGAGAAGCTGAGGAGGAAGGTTGAGGTGGTCCCTCCCAAGAAAGAGAAGGAGGGTGACAAGGAAGGAGAAAAGGACAAGGAAGGATCGGGGAAGAAGAAGAACAAGGGTGGTGGTGGTGGTGGAGGAGACAGTAACGAAGGGGTAATAGAGAAAATAGATTACAGCAGAATGGAGTATTTGCCACAACCTGCTTTTGGCTTTGGTTATGGTTATGGACACGGAAATAGTGGTGGCTATAGCTATGTGCCAGTGTACCCGGAGCAGATGCACTTTCACTTGCATGCACCACCCCCACAAATTTTCAGTGACGAGAACCCGAATGCTTGTTCTGTCATGTGA 855 0.5076 MGAKKKSGGGNGNKENEDGTTTVVLKIDFHCDGCASKITRHLRSLQGVETVQADGDAGKVTVTGKIDAVKVRDNLAEKMKKKVEIVSPQPKKEKEESKDAKANNKTQDKKNKDKEVTTAVLKMALHCQGCLDRIGKTVLKTKGVKEMAIDKEKETVTVKGTMDVKALAENLMEKLRRKVEVVPPKKEKEGDKEGEKDKEGSGKKKNKGGGGGGGDSNEGVIEKIDYSRMEYLPQPAFGFGYGYGHGNSGGYSYVPVYPEQMHFHLHAPPPQIFSDENPNACSVM 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01136 284 MobiDBLite consensus disorder prediction 178 219 - -
Vian5g01136 284 Pfam Heavy-metal-associated domain 124 180 IPR006121 GO:0046872
Vian5g01136 284 Pfam Heavy-metal-associated domain 27 82 IPR006121 GO:0046872
Vian5g01136 284 Gene3D - 116 189 - -
Vian5g01136 284 Gene3D - 20 94 - -
Vian5g01136 284 CDD HMA 30 84 IPR006121 GO:0046872
Vian5g01136 284 CDD HMA 125 180 IPR006121 GO:0046872
Vian5g01136 284 MobiDBLite consensus disorder prediction 82 114 - -
Vian5g01136 284 SUPERFAMILY HMA, heavy metal-associated domain 117 176 IPR036163 GO:0046872
Vian5g01136 284 MobiDBLite consensus disorder prediction 178 205 - -
Vian5g01136 284 ProSiteProfiles Heavy-metal-associated domain profile. 20 91 IPR006121 GO:0046872
Vian5g01136 284 ProSiteProfiles Heavy-metal-associated domain profile. 116 187 IPR006121 GO:0046872
Vian5g01136 284 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 6 4 284 IPR044594 GO:0046872
Vian5g01136 284 SUPERFAMILY HMA, heavy metal-associated domain 18 86 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01136 Vian-Chr5 33438238 33439578 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01136 - - gsj:114377132 354.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01136 5 33438238 33439578 Vian5g01136 5 33438238 33439578 ECH