Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01097 ATGCAGCCGAACTTGTTTCCCTTTGGAAGTGTGCTGGGGAATCCGTTTATTTTCAATGGTGATTTGAGTGAGGGAGGGATCGAGAGCTCTAGGGTTTTCTTCTTGCTCCCGTTCTTCTTGCTCTCCCAGGGAGGAGCAATGGATTTGTCCAAGGTTGGGGAAAAATTCTTGAGCTCCGTTAGGTCCGCGAGATCTATCGGATTGCTCCCTCCCGTTCCTGATCGTCCCGAGGTTCCAGCTCGAGCTTCAGCAGCTGCTGCCGTAGCTCGTGCTCTTGCAGGGTTACCTCCTCATCAGAGATATAGTTTTTCTTCAAGTTCAGAAGAATTGAGTTCAATATATGGAAGCAGACCTCAAGGCCAAGTAGTCGAGGAGCTGGAGGATGAGTTTTATGAAGAGGACTTTGATCCAATTAAGCATATTTTAGAGCATGTTCCAGCTGATGAGAATGAGCTAACATATTTTGAAAAACAGGCTGCCCTTAGATTGGTACAACTGGATAAAGTGGCTGAACATTTATCTCGCCATGTTATGGAGCATCATGAAGTAATGGTGAAGGGGATGAATTTGGTCAGAGAATTGGAAAAAGACTTAAGAATTGCAAATGTCATCTGTATGAATGGAAGGAGACATTTGACATCGTCTATGAATGAGGTTTCAAGGGATCTGATTGTGAATTCTTATTCCAAAAAGAAACAAGCTCTTCTGGACATGCTTCCAACCTTGATTGAACTTCAACGGGCTCTGAACATGCAATCAACACTTGAATCCCTAGTAGAGGAAGGGAATTACTGGAAGGCCTTTCAAGTTCTATCTGAGTATTTGCAACTCTTAGATAGTTTGTCAGAGCTTTCAGCAATACAAGAAATGAGTCGTGGTGTGGAGGTTTGGCTGGGAAGAACGTTGCAAAAGCTGGATGCTCTTTTATTGGGAGTATGTCAAGAATTCAAGGAAGATGGCTATATAACAGTAATTGATGCATATGCATTAATAGGGGATACTGCTGGTCTTGCTGAAAAGATACAGAGTTTCTTCATGCAAGAAGTTATATCAGAAACACACTCTGTATTAAAGGGTGTCATGCATGAGGACGAGGAGGATATTTTGCAAAATAGTAGGCTCACTTACAGCGATCTATGCCTCAGAATACCTGATTCAAAGTTCAGGCAATGCTTATTAAGAACGCTGGCTGTTCTATTTGACCTTATGTGTTCATACCATGAAATTATGGATTTCGAGCTGGAAAGAAAGGACATAGTACAAAATTCAAATAAGTGCAATGAAGAGATTTCCTGTAGTCCAGGCGCTCAGGAAGTTGATTCAGATGTAAGAGCCTCCAACAATTCTTTGTCCAGTTCAGGAGATATATTACATGGTTCATCTTCTAGGGAGGAATCTGCAACAATGAGCTCTCTGACTGAAACTAGTGGTTCACCATACAGTGATTATCACGATCCAATTAAGGAGACTGGGAAGGAGGACAGTGCAACGTTAAACATTGAATCCCCTTGGTACCATCTTCGTAAAGAAGCTACAACCTTTGTGTCACAGACCCTTCAAAGAGGGCGAAGGAATTTGTGGCATCTCACTGCAAGTCGAGTGTCTGTTTTGCTTTCTTCTGCTGCAGTTTGTACCGCTAGTATATATCAATTCTTGAAAAATTATGAAGAACTCAGTGTGTTTATTTTGACTGGGGAAGCCTTTTGTGGAATCGAAGCAGTTGAATTTAGGCAGAAGCTAAAGGCTGTGTGTGAAAACTATTTCACAGCTTTTCATCGACAAAATGTGCATGCACTAAAAATGGTTATGGAGAGAGAGACTTGGCTAAAATTACCTCTAGAAACAGTACAAATGATCAGTTTTGCAGGACTTATTGGTGATGGCGCACCCTTGATTTCTTTATCCAGTGGCAAATCAATTAATGCCAGTGCATTCCATTCTCATAAATCAGTGAATATGGTTCATACTGGTGCAAGGAAAAATGGGTTTTCCCAGTGGATCAAAAGTGGAAACCCTTTCTTGCAAAAATTACCTAACTCCAATGAAGGTCATGGTTACTCCCAACCTAATGGATTAGTTCATGGTGAATCTGATGGAAGTTCAACCAAATACTTTTATGATGATAGAACACCCAGAAACAACGATTCCAATCACATAAATGGTGCCAATTCTCTTTCAGAAGATGAAGATGAAGATCTTCTTGCTGACTTTATTGATGAAGACAGCCAACTACCAAGTCGAAGTTCTAAACCCTTTCATTCAAGAACTCTTTCTTCACATGGTAATGATGACGAGAATACAACACAAACTGGATCTTCTCTCTGTCTTTTAAAGTCTATGGATAAATATGCAAGGCTTATGCAGAAATTGGAATTGGTAAATGTTGAGTTCTTTAAGGGAATATGCCAATTGTTTGAAATATTTTTCTATAATATATATGAAACATTTGGTCAGCAAAACACTAGCTCAAGTGGAAAAAGCTCAACTAACTCTCTTAATTATCGCTTGAGAACAGCTTTGTCTAGAATAAACCAAGATTGTGAAGAGTGGATTAAGCCTCAATCGTCTTCACCAACATCTTTGACCTCTTCATTTGCACATGCAGAATTGACACCTACAAACCCGCCCAATGCAAATCTTGGTCATTCCTCAGGCACCTCTTTTGGTCTCACGGAAAGATGTGTGGCTGTTGACACTATATCACTTGTTGCTCGAATACTGAATAGATCTAAAGCTCATCTCCAATCAATGCTCTTGCAAAGTAATTCAACTATACTTGAGGATTTCTACGTTCATCTGGTGGATGCTGTACCAGATCTTACAGAACATATTCATCGGACTACAGTGAGACTATTGTTGCACATTAATGGATATGTTGATCGTGTTGCCAATTGTAAATGGGAATTAAAAGAGCTTGGCATGGAGCATAATGGATATGTTGATTTGTTGCTGGGGGAGTTTAAGCACTATAAAACAAGACTTGCTCATGGAGGAATTCGTATAGAGATTCAAGGCCTATTATTGGATTATGGGCTTGAAATTGTGGCAGAAACTCTTGTTGAAGGACTTTCAAGGGTGAAGAGATGCAGTGATGAAGGACGAGCTCTTATGTCATTAGATCTTCAGGTTTTGATTAATGGATTACAGCATTTTGTGTCAGTGAATGTGAAGCCCAAGCTTCAAATGGTTGAAACTTTCATCAAGGCTTACTACCTTCCCGAGACAGAATATGTGCACTGGGCTCGAGCACACCCAGAATACACTAAAAGCCAGATTATTGGACTGATCAACCTTGTTGCCACTATGAAAGGTTGGAAGAGGAAAACCAGGTTGGATATACTGGAAAAGATTGAATGA 3357 0.4036 MQPNLFPFGSVLGNPFIFNGDLSEGGIESSRVFFLLPFFLLSQGGAMDLSKVGEKFLSSVRSARSIGLLPPVPDRPEVPARASAAAAVARALAGLPPHQRYSFSSSSEELSSIYGSRPQGQVVEELEDEFYEEDFDPIKHILEHVPADENELTYFEKQAALRLVQLDKVAEHLSRHVMEHHEVMVKGMNLVRELEKDLRIANVICMNGRRHLTSSMNEVSRDLIVNSYSKKKQALLDMLPTLIELQRALNMQSTLESLVEEGNYWKAFQVLSEYLQLLDSLSELSAIQEMSRGVEVWLGRTLQKLDALLLGVCQEFKEDGYITVIDAYALIGDTAGLAEKIQSFFMQEVISETHSVLKGVMHEDEEDILQNSRLTYSDLCLRIPDSKFRQCLLRTLAVLFDLMCSYHEIMDFELERKDIVQNSNKCNEEISCSPGAQEVDSDVRASNNSLSSSGDILHGSSSREESATMSSLTETSGSPYSDYHDPIKETGKEDSATLNIESPWYHLRKEATTFVSQTLQRGRRNLWHLTASRVSVLLSSAAVCTASIYQFLKNYEELSVFILTGEAFCGIEAVEFRQKLKAVCENYFTAFHRQNVHALKMVMERETWLKLPLETVQMISFAGLIGDGAPLISLSSGKSINASAFHSHKSVNMVHTGARKNGFSQWIKSGNPFLQKLPNSNEGHGYSQPNGLVHGESDGSSTKYFYDDRTPRNNDSNHINGANSLSEDEDEDLLADFIDEDSQLPSRSSKPFHSRTLSSHGNDDENTTQTGSSLCLLKSMDKYARLMQKLELVNVEFFKGICQLFEIFFYNIYETFGQQNTSSSGKSSTNSLNYRLRTALSRINQDCEEWIKPQSSSPTSLTSSFAHAELTPTNPPNANLGHSSGTSFGLTERCVAVDTISLVARILNRSKAHLQSMLLQSNSTILEDFYVHLVDAVPDLTEHIHRTTVRLLLHINGYVDRVANCKWELKELGMEHNGYVDLLLGEFKHYKTRLAHGGIRIEIQGLLLDYGLEIVAETLVEGLSRVKRCSDEGRALMSLDLQVLINGLQHFVSVNVKPKLQMVETFIKAYYLPETEYVHWARAHPEYTKSQIIGLINLVATMKGWKRKTRLDILEKIE 1118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01097 1118 MobiDBLite consensus disorder prediction 440 480 - -
Vian5g01097 1118 MobiDBLite consensus disorder prediction 852 882 - -
Vian5g01097 1118 MobiDBLite consensus disorder prediction 677 697 - -
Vian5g01097 1118 PANTHER UNCHARACTERIZED 47 1118 IPR040047 GO:0032456|GO:0042147|GO:1990745
Vian5g01097 1118 MobiDBLite consensus disorder prediction 437 488 - -
Vian5g01097 1118 Pfam Protein of unknown function C-terminus (DUF2451) 888 1118 IPR019514 -
Vian5g01097 1118 MobiDBLite consensus disorder prediction 677 725 - -
Vian5g01097 1118 Pfam Vacuolar-sorting protein 54, of GARP complex 123 412 IPR019515 -
Vian5g01097 1118 MobiDBLite consensus disorder prediction 743 770 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01097 K23288 - gmx:100803274 1935.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01097 5 32929749 32957707 Vian5g01097 5 32929749 32957707 ECH