Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01090 ATGTTGCCACCTAACCTTTACAAACCAGCTACACTGTGTGCACCAGATTCAAAGCAAACGAATAGAGTTAGATTGTCAGTTCTCAAAACGTATGGGGTATTCAAGGCCCTTCTTGGCTTCTTTTCTTCTTGCTTTGTTGCTCAATGTGACCAATGGGCAGCCCCTGCTGAAGTCCTTGGATTTACCTCTTATCCCCCAGCTTACCTTAACTTGAACACCAAAGGAAATAACCTCTTGAATGGTGCTAACTTTGCCTCAGCTGCTTCTGGTTACTATGAACCCACAGCCAAACTATATAATGCAATTCCATTGCGCCAGCAGCTGGAATACTACAAGGAGTGCCAGAACAAATTGGTGGAAGCAGCAGGACAATCAAGTGCTTCATCAATTATATCTGATGCTATATATCTTGTCAGTGCTGGAACCAGTGATTTCATTCAGAACTACTACATAAATCCTTTGCTTAACAAGTTTTATACAATTGATCAATTCTCAGACACCCTCTTGAGGTTCTATTCAGACTTCATCCAGAGTTTACATGCACTGGGAGCAAGGAGGATCGGTGTGACATCATTGCCTCCAATAGGTTGCTTACCTGGAGCCATCACTCTCTTTGGTTTTAATAGCAACGAATGTGTGGCCAGTTTAAACAGTGATGCAATTACCTTCAATGAAAAGCTAAACACCACATCTCGTAACTTGCAAAATATGCTTCCAGGCCTCAATTTGGTTGTCTTTGATATCTACCAACCTCTCTATGATTTGGTCACCGAGCCTTCTGAAAATGGATTTTTCGAAGCAAGGAAGGCTTGTTGTGGAACAGGGTTGATAGAGACATCTATATTGTGCAATAGGAAGTCCATAGGAACATGCGCCAATTCATCTGAGTATGTATTCTGGGATAGTTTCCATCCCTCAGAGGCTGCTAACAGGCTTTTGGCTGATAGTTTGGTTGCTGCTGGAATCTCTCTCATATCCTAA 981 0.423 MLPPNLYKPATLCAPDSKQTNRVRLSVLKTYGVFKALLGFFSSCFVAQCDQWAAPAEVLGFTSYPPAYLNLNTKGNNLLNGANFASAASGYYEPTAKLYNAIPLRQQLEYYKECQNKLVEAAGQSSASSIISDAIYLVSAGTSDFIQNYYINPLLNKFYTIDQFSDTLLRFYSDFIQSLHALGARRIGVTSLPPIGCLPGAITLFGFNSNECVASLNSDAITFNEKLNTTSRNLQNMLPGLNLVVFDIYQPLYDLVTEPSENGFFEARKACCGTGLIETSILCNRKSIGTCANSSEYVFWDSFHPSEAANRLLADSLVAAGISLIS 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01090 326 Gene3D SGNH hydrolase 52 322 IPR036514 -
Vian5g01090 326 SUPERFAMILY SGNH hydrolase 123 319 - -
Vian5g01090 326 CDD SGNH_plant_lipase_like 56 317 IPR035669 -
Vian5g01090 326 PANTHER GDSL ESTERASE/LIPASE EXL3 56 317 - -
Vian5g01090 326 Pfam GDSL-like Lipase/Acylhydrolase 62 316 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01090 Vian-Chr5 32856235 32858203 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g01090 56 317 Acyl Lipid Metabolism Gene Families AT4G10950 27.547 2.80e-34 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01090 - - gmx:100775618 458.373