Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01088 ATGAATCGAAGCAGCACAATGGCGCGAGTGGATCTGGACGGTAACCCCATCAAGCCTATCACGATCTGCATGATCGGTGCCGGTGGGTTCATCGGCTCGCACCTCTGCGAGAAACTCATGCACGAAACCCCTCACACGGTTTTCGCCTTGGACGTTTACAATGACAAGATCAAGCACCTTCTGGAACCCGATTCTCTGCCTTGGGCCGGTCGCATCACCTTCCACCGCCTCAACATCAAACACGATTCTCGTCTCGAAGGTCTCATCAAGATGGCAGATCTCACCATTAATCTCGCTGCGATTTGCACCCCTGCGGATTACAACACGCGCCCGCTGGACACCATTTACAGCAATTTCATTGACGCGCTCCCCGTGGTGAAATACTGTTCGGAGAATAACAAGCGCCTTATCCACTTCTCCACTTGCGAAGTGTACGGGAAAACGATTGGAGCCTTTCTCCCCAAAGATAGTCTTCTTCGTAAGGATCCGGCGTACTTTGTCCTTAAAGAAGACGAATCTCCTTGCATTTTTGGTTCTATTGAAAAGCAGAGGTGGTCTTACGCCTGTGCTAAACAGTTGATTGAGAGGCTGATTTATGCTGAGGGTGCTGAAAATGGTTTGGAATTCACCATTGTTAGGCCTTTTAACTGGATTGGACCTAGAATGGATTTCATTCCTGGCATCGATGGTCCAAGTGAGGGTGTTCCTCGGGTTCTTGCATGCTTTAGCAATAATCTTCTTAGAGGAGAGCCCCTCAAGCTTGTAGACGGGGGACAGTCTCAAAGAACCTTTGTTTACATTAAAGATGCTATTGAAGCTGTCTTGTTGATGATTGAAAATCCTGCCAGAGCTAATGGTCATATATTTAATGTCGGTAACCCAAACAACGAGGTTACTGTTAGGCAGCTCGCTGAAATAATGATTCAGGTTTACTCAAAGGTGAGTGGAGAAAAAACTCCTGAAACCCCAACCATTGATGTGAGCTCAAAAGAATTTTATGGTGAGGGATATGATGACAGTGATAAGAGAATTCCTGACATGACCATAATAAACAAGCAGCTTGGTTGGAATCCTAAGACTTCGCTCTTCGACCTGCTGGAATCCACTCTGACCTATCAGCACAGGACATATGCTGAAGCCATCAAGAAAGTAATTGCAAAACCCGTTGCAAGTTAA 1176 0.4643 MNRSSTMARVDLDGNPIKPITICMIGAGGFIGSHLCEKLMHETPHTVFALDVYNDKIKHLLEPDSLPWAGRITFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGAFLPKDSLLRKDPAYFVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRGEPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEIMIQVYSKVSGEKTPETPTIDVSSKEFYGEGYDDSDKRIPDMTIINKQLGWNPKTSLFDLLESTLTYQHRTYAEAIKKVIAKPVAS 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01088 391 Gene3D - 20 382 - -
Vian5g01088 391 FunFam UDP-D-apiose/UDP-D-xylose synthase 2 20 383 - -
Vian5g01088 391 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 21 376 - -
Vian5g01088 391 CDD Arna_like_SDR_e 21 376 IPR045869 GO:0016831
Vian5g01088 391 Pfam NAD dependent epimerase/dehydratase family 22 292 IPR001509 -
Vian5g01088 391 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 21 374 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01088 Vian-Chr5 32830303 32832630 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01088 K12449 - gmx:102667779 759.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00538 11 5409503 5411755 Vian5g01088 5 32830303 32832630 PCT