Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01085 ATGGGAGCTCTGTTTCCTGATGAAAAACCTGAGAACCCAAATGGTGTTCATCAATTTCAGCAGCAACATGAAATTGATGCAGGAGCTCTTTTTGTCCTCAAATCCAAAGGTTCTTGGTTGCATTGTGGATACCATTTAACCACATCGATAGTGGCACCAACTCTTCTAAGTCTTCCTTATGCATTTACCTTCCTTGGATGGACGGCTGGGATCTCATGCTTGTTGATCGGAGCATTGGTGACTTTTTATTCATATAATTTAATATCTAGAGTTCTTGAACACCACGCCGACAATGGTAAACGTCAACTACGTTTTAGAGACATGGCACGTGATATTTTAGGTCCAAGATGGGGTCGTTATTTTGTTGGCCCAATTCAGTTTGCAGTTTGTTTTGGTTGTGTAGTTGCTTGCATTCTATTAGGAGGCCAATGCATGAAGGCAATTTACTTACTGTCAAATCCAAACGGGACCATTAAGCTTTACGAGTTTGTAATCATATTTGGATGCTTCATGCTGATTTTGGCTCAAATTCCATCTTTCCACTCACTCAGACACATTAATCTGCTGTCACTCATTCTCTGCTTGGCCTATAGTGCTGCCGCTACGGCTGGTTCCATTTACATTGGAGAGTCATCCAGAGGACAAGAAAAGGACTACTCTATAAAAGGTGACACTGAAAATCGCTTATTTGGATTCTTCAATGCAATTTCCATCATTGCCACAACCTATGGAAATGGAATCATTCCAGAAATTCAGGCAACACTAGCACCACCCGTGAAAGGGAAAATGTTCAAGGGACTATGTGTATGCTATTTTGTACTCATAGTCACTTTCTTTAGTGTATCTGTTTCTGGTTATTGGGCATTTGGCAATGAATCTAAAGGCCTCATATTAAGCAATTTTGTAGAGAATGGGAACCCATTGGTGCCCACATGGTTCATTTACATGACCAACATTTTCACTATAACACAACTATCAGCAGTTGGTGTGGTTTATTTGCAACCAACAAATGAAGTGCTGGAGCAAGCATTTGGAGATCCAAAAAGCCCTGAGTTCTCGAAACGCAATGTAATACCGAGAGTGATTTCACGATCACTAGCTATTACTATTTCAACCATTATAGCAGCCATGCTTCCATTTTTTGGAGACATAAACTCTCTTATTGGAGCTTTTGGCTTTATCCCTCTTGATTTCATCTTGCCAGTCATTTTCTACAACTTCACATTTAAGCCATCTAAGCGAACCTTTATTTTCTGGTTGAATCTAACTATTGTCGTCACTTTCTCTGCATTGGGAGCTATAGCCGCAATTGCAGCAGTTAGGCAGATTGTTATTGATGCAAAAGATTATCGATTATTTGCTAATGTATGA 1371 0.399 MGALFPDEKPENPNGVHQFQQQHEIDAGALFVLKSKGSWLHCGYHLTTSIVAPTLLSLPYAFTFLGWTAGISCLLIGALVTFYSYNLISRVLEHHADNGKRQLRFRDMARDILGPRWGRYFVGPIQFAVCFGCVVACILLGGQCMKAIYLLSNPNGTIKLYEFVIIFGCFMLILAQIPSFHSLRHINLLSLILCLAYSAAATAGSIYIGESSRGQEKDYSIKGDTENRLFGFFNAISIIATTYGNGIIPEIQATLAPPVKGKMFKGLCVCYFVLIVTFFSVSVSGYWAFGNESKGLILSNFVENGNPLVPTWFIYMTNIFTITQLSAVGVVYLQPTNEVLEQAFGDPKSPEFSKRNVIPRVISRSLAITISTIIAAMLPFFGDINSLIGAFGFIPLDFILPVIFYNFTFKPSKRTFIFWLNLTIVVTFSALGAIAAIAAVRQIVIDAKDYRLFANV 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01085 456 Pfam Transmembrane amino acid transporter protein 36 440 IPR013057 -
Vian5g01085 456 PANTHER OS05G0424000 PROTEIN-RELATED 38 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01085 Vian-Chr5 32752345 32763230 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g01085 128 456 Organic Solute Cotransporters AT1G08230 66.163 2.77e-156 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01085 - - gmx:100791114 794.267