Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01076 ATGAGAAGTAATACTTCCCAGTGTGCTTATGCTAAAGCAGAGGAAGCCTCCAAGGAAAAAACTCTCCATGTTAAAACAGAGGAAGATGAAGTTCCAGCTTTTGTAGATGATGATGAGGATCTCTGTAAATCCTTAGAGAAAGGAAGAAGATTGGGTCTTAAAAATCATGAGGAAGAGATAATCACGAAAGAACCAGGTGGTCTTCACAGAGATGGAAGAATGTCTGGGAGTGGCAGCAGACACAGTACGATGTTTTTGGTGGTAAGACCATGTGGTTCTTCTTCTGCGGGTATTCATCGTCTTCACCCCACTCCCTCATCGCACCGTAGCAGAAACGTCGTCATTCGATGCTCGCTCAGCAGCGTGCAGGAGAAGAAGGAGAAAGCTGAATTGGATTCGGAGCTGCAGCCTTCGCTGGCATTTCCACCGATCAGGGCGGCGAAGAGGGTGGTTCTGGTGAGGCACGGGCAAAGCACGTGGAACGCAGAGGGGAGAATCCAAGGAAGCTCTAATTTCTCTGTTCTGACGAAGAAGGGGGAGTCTCAGGCTGAGACCTCACGCCAAATGCTCATCGACGACCACTTCGATACCTGCTTTGCCAGTCCTTTGGCTCGATCCAAGAAAACCGCTGAAATCATTTGGGGATCTCGCCAGGACCCCATCATTACCGACTTTGATTTGAGGGAAATCGATTTGTACTCCTTTCAAGGTCTGCTGAAGCATGAGGGGAAAGCAAAATTTGGTTCTGCTTATCGTCAATGGCAGGTGGATGCTGAGAATTTCATCATTGATGGTCATTATCCAGTTAGAGAATTGTGGGAACGTGCTAGAAGCTGCTGGACTAAAATCTTAGCTCATGATAGCAGGTCTGTTCTTGTGGTTGCTCACAATGCTGTTAATCAGGCTCTTGTTGCCACAGCAATTGGTCTGGGGTCTGAGTATTTCAGAACATTACTTCAGAGCAATTGTGGTGTTAGTGTGCTGGACTTCATCCCAAGATCTGATGATGGATCTCCGCATATTTGCCTTAACCGCTTAAATCAGACCCCTGGTTCACCTATTGCTGGTGGGAAATCTGGAGGTCGAGAGACAAGTAAGAGGATCGTACTTGTTTGTAATGGATCAACACAAGGAAATACAGAGGATGGTTTTCCTTTGGGTGGTGATCAACCATTGAACATGCTTGGTGTCATACAGTCCCAGAAATCTGCAGAGCTACTACTTGATTTGAGAGTGAGTTCCATAATTAGCAGTCCCAATAAAGCCTGTGTTGGGACAGCCTCGGTAATCTCCCAGGTACAAGAAGCTGCAGACTGCTTGGGAGCTGACTGTGTGCCTCGATATGTTGAGATGAAGCAGATGGGGGAACTTGATATAAAAAGCGTGATGACAAACAATGATATATCCAATTTTCCGCCATTTCAACCTGGTTGGTTAAATAGAGTAGATGATGGACTGAGAACAACATTATGGAATCAATCTGGAAAAGCCTGGCTATCTTTGTTGGATGAAATATCTGATGAATCTAAGCCAGGAGAAGTTATAGTGGCAGTTGGTCATCCTGCAATCAACATAGCACTAATGGGGCACTGCCTTAATTTGAGCAAAGAATGGTTGGGATCATTTCATCTTGATGCAGGGAGCGTTAGTGTTCTTGACTTCCCTGATGGAGCTAAGGGAAAAGGTGTAATCAGATGCATAAATTATACTGCACACTTGGGGAGATGGTCCATACCTATCACAAGATCAACAGAAGATGGTGAAGAGTTTTAA 1773 0.454 MRSNTSQCAYAKAEEASKEKTLHVKTEEDEVPAFVDDDEDLCKSLEKGRRLGLKNHEEEIITKEPGGLHRDGRMSGSGSRHSTMFLVVRPCGSSSAGIHRLHPTPSSHRSRNVVIRCSLSSVQEKKEKAELDSELQPSLAFPPIRAAKRVVLVRHGQSTWNAEGRIQGSSNFSVLTKKGESQAETSRQMLIDDHFDTCFASPLARSKKTAEIIWGSRQDPIITDFDLREIDLYSFQGLLKHEGKAKFGSAYRQWQVDAENFIIDGHYPVRELWERARSCWTKILAHDSRSVLVVAHNAVNQALVATAIGLGSEYFRTLLQSNCGVSVLDFIPRSDDGSPHICLNRLNQTPGSPIAGGKSGGRETSKRIVLVCNGSTQGNTEDGFPLGGDQPLNMLGVIQSQKSAELLLDLRVSSIISSPNKACVGTASVISQVQEAADCLGADCVPRYVEMKQMGELDIKSVMTNNDISNFPPFQPGWLNRVDDGLRTTLWNQSGKAWLSLLDEISDESKPGEVIVAVGHPAINIALMGHCLNLSKEWLGSFHLDAGSVSVLDFPDGAKGKGVIRCINYTAHLGRWSIPITRSTEDGEEF 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01076 590 CDD HP_PGM_like 149 330 IPR013078 -
Vian5g01076 590 Pfam Histidine phosphatase superfamily (branch 1) 368 558 IPR013078 -
Vian5g01076 590 Pfam Histidine phosphatase superfamily (branch 1) 150 331 IPR013078 -
Vian5g01076 590 SUPERFAMILY Phosphoglycerate mutase-like 148 344 IPR029033 -
Vian5g01076 590 SMART PGAM_5 367 527 IPR013078 -
Vian5g01076 590 SMART PGAM_5 149 303 IPR013078 -
Vian5g01076 590 FunFam Putative 2-carboxy-D-arabinitol-1-phosphatase 359 577 - -
Vian5g01076 590 Gene3D - 148 336 IPR029033 -
Vian5g01076 590 SUPERFAMILY Phosphoglycerate mutase-like 365 578 IPR029033 -
Vian5g01076 590 FunFam Phosphoglycerate mutase 148 352 - -
Vian5g01076 590 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 152 161 IPR001345 GO:0003824
Vian5g01076 590 Gene3D - 360 577 IPR029033 -
Vian5g01076 590 PANTHER BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED 363 558 - -
Vian5g01076 590 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01076 Vian-Chr5 32549243 32553778 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01076 K22200 - gmx:100798495 876.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01076 5 32549243 32553778 Vian5g01076 5 32549243 32553778 ECH