Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01059 ATGGGAAGCACCTCCTTCTGCTTGCTCCACTCATCCCTTTGCAAATTCCCATCTTCATCTTCATCTTTTTCATCTTCATCTGGATACAGACCAAAGACCAAGTTGCGAGCTCCTACGTCCTCCTGCTTGGGCCAGCAAGACCCAGTCTGCAGCAAAAGAACCATTCTTTTAACCAGCATAGCCCTTCTTCCATTTCGCCGTTTGAAGAGGGCCCCAGCTCTAGAACCACCGGCCGTAACTCCAACTGAAGAAAATGAGGTGAAGACACAAGAGGATAACCAGGAAGCTGAGACAGCACCTGAAGTGGAAACACCATCAAATTCCTTTCTGTCTCTCCTGAATGGAATTGGAATATTTTCTTCTGGTGTGCTGGGTGCTCTCTATACACTTTCTCAGAAAGAAAAGGCTGCTGCTGATGCAACAATAGAAACAATGAGCTGGAAACTGAAGAAAAAGGAAGAACTGATTGTTTCCTTAAAGAAGGACTATGAGCTGAAGTTACTGAATAAGCAGGAGGAACAAGCCAACCTACTTGAAAAGGCAAAGGAAGAGAAGCAAGCATTGATGGAACAACTAAATTCTGCGATCAGTACAATCAACCACTTGGGGAAGGAGCTTAAAAATGAGAGAATTTTGGTTGAGGACCTGAAACTTCAAATTGACAGACTTGAGACTGAGCTTTCAAAGATTGATACAGATAAGAAAGATCTTGAAACCAATTTGAAAGAAAAGATAGATTTCATTGGAGTTTTACAGGAAAGAATCAATCTTCTCAGTGAGGACCTCAAAGACAAAGAAGATGTTGTTAAGAATCTCAATTCATCTCTAGCAGTAAAGGAGTTGGAATTGAAGAGATTGAATTCTACCTATGAGAAAACCAAGGATGACTTATCCAGTGTACAATTGCAGATTCAAGGGTTGAAAGATGAACTACTTAAAAGCCAACAGGAACTAGAAGCTAAAGATTCCTTGGTGATGGAACTAAATTCAAGATTGAGTTCCTTAACTCATGAGAATGATGATTTTAGGAGTAAATATGATGTCATGGAGAAGGAATACAATGACCTAAAACTCACTACTGAAAGAAAGGCTGCTTTGGACTCTAGGGTTTTAAGTGAAAAAGAAGAGGAGCTTCTTCAGCTAAAGCATCAATTTGAACTTGCCCTGCGTGAATCAAGCCAAAACCTGCTCATCAATGCTGATTTATCCCGGGAAAGAGATTTGTTGAAGGAGGCTCTTGAGAATAAATCTGGTAAAGTGAATCATTTGAAGCATGAACTTCAAGACACCCAGGGAAATCTTGAAAAATCAAGAAATGAGTCTGCTGAATTGGAAAACCTTTTAAGTGAGTCAAACAAACTGCGCAATGACCTTGTGGTTGAGGTGTCTAAGCTTTCATCTGAGCTCACTGAAGTTAAAGGATCACTACAGAGAAGTCTTGATAATGCAAAACATGAGGCAGAGATGCTAGCAAGTGAGGTTACAACTGCAAAGGAACATTTGAAGAAAACCGAAGCAGAGCTACAAGGTAAGTCCCATGATTTAACAATTGCTCTTGAAAAGTGTGATAGCCTACAAAAAGAATTAATTGAGATATACAAAAAGGCTGAGACCACAGCAGAGAATTTAAAGGAAGAAAAACAGTTAGTTGATTCTTTGAAAAAAGATATACAAACTTTAGAGAAGCAAATCTCAGAAGACAAGGAGTCCCGAAAATCTCTTGAGACGAACTTGAAGGAGGCTGTCAAATCACTTGATGAAATGAACCGAAATGCAACGATCCTTTCTAGTGAACTACAGAGAACCAACTCTCTTATTTCTAGCCTTGAAAAAGAGAAAGAGGTGCTTATGAATTCCCTAGCAGACCAAAGAAATGCAAGCAAAGAGGCCAAGGAAAACATTGAAGATGCTCATAACCTCATCATGAAACTCGGCAATGAAAGAGAGAATTTAGAGAGAAAAGGGAAGAAATTGGAGGAGGATTTGGCTTCTGCCAAGGGTGAGATATTGCGCTTAAAGAGCCGAATCAGCTCTTCTAAAGTTGCTGTTAACAATGAGAAAGTGCGGAAAGATGAAAGTGAAGGCAAGGTCAATTCTTCAAAAGTTACTGTTAACAATGAGCAAGTGCAGAAAAATGAAGGGGTCAATTCTTCAAAAGTTGCTGTTGACAACGAGCAAGTGCAGAAAAATGGAGGTGAAAGCAAGGTTACTGTAACTGCGAGGAAGACTGTGAGAAGAAGAAAAGCTAATCCACAATAA 2259 0.3984 MGSTSFCLLHSSLCKFPSSSSSFSSSSGYRPKTKLRAPTSSCLGQQDPVCSKRTILLTSIALLPFRRLKRAPALEPPAVTPTEENEVKTQEDNQEAETAPEVETPSNSFLSLLNGIGIFSSGVLGALYTLSQKEKAAADATIETMSWKLKKKEELIVSLKKDYELKLLNKQEEQANLLEKAKEEKQALMEQLNSAISTINHLGKELKNERILVEDLKLQIDRLETELSKIDTDKKDLETNLKEKIDFIGVLQERINLLSEDLKDKEDVVKNLNSSLAVKELELKRLNSTYEKTKDDLSSVQLQIQGLKDELLKSQQELEAKDSLVMELNSRLSSLTHENDDFRSKYDVMEKEYNDLKLTTERKAALDSRVLSEKEEELLQLKHQFELALRESSQNLLINADLSRERDLLKEALENKSGKVNHLKHELQDTQGNLEKSRNESAELENLLSESNKLRNDLVVEVSKLSSELTEVKGSLQRSLDNAKHEAEMLASEVTTAKEHLKKTEAELQGKSHDLTIALEKCDSLQKELIEIYKKAETTAENLKEEKQLVDSLKKDIQTLEKQISEDKESRKSLETNLKEAVKSLDEMNRNATILSSELQRTNSLISSLEKEKEVLMNSLADQRNASKEAKENIEDAHNLIMKLGNERENLERKGKKLEEDLASAKGEILRLKSRISSSKVAVNNEKVRKDESEGKVNSSKVTVNNEQVQKNEGVNSSKVAVDNEQVQKNGGESKVTVTARKTVRRRKANPQ 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01059 752 Coils Coil 371 391 - -
Vian5g01059 752 MobiDBLite consensus disorder prediction 698 737 - -
Vian5g01059 752 SUPERFAMILY Tropomyosin 463 692 - -
Vian5g01059 752 Coils Coil 526 675 - -
Vian5g01059 752 Gene3D - 452 626 - -
Vian5g01059 752 Coils Coil 160 240 - -
Vian5g01059 752 MobiDBLite consensus disorder prediction 74 105 - -
Vian5g01059 752 Coils Coil 473 507 - -
Vian5g01059 752 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 2 100 685 - -
Vian5g01059 752 Coils Coil 255 359 - -
Vian5g01059 752 MobiDBLite consensus disorder prediction 17 40 - -
Vian5g01059 752 MobiDBLite consensus disorder prediction 682 752 - -
Vian5g01059 752 Coils Coil 399 457 - -
Vian5g01059 752 Gene3D - 213 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01059 Vian-Chr5 32313809 32317512 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01059 - - gmx:100791634 989.949