Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01045 ATGCATAATGACACAGAAGAAAAAGATGGATCTGAAACCGAAACCATCAAACAAATCATCGATCCGTTTTCTTCTTTTCCACATATAGCAACTGTGAAACCTAATTTCTACACTCTTCCGATGAAACGCACGGTTCGGCCTCTCTTCGCGCTCCTCCTCCTCCTAGTCTTCGCCGCCACGCTCACTTCACGCGTGGTCCTCCGCCGCGGCATCCTCTCCATCGAGCTCGAGTACCGCGTCCGGATCCGCAACCCTCCGCCGCCGCAGCTCAACGACACGCTCCTCCACCACGCCGCGGTGGAGATCGGCGAAGAGAAGTTCAAGCAGGAGATCCAGAACCTCCTCGACGGAAACTTCGGCAGCCATGCGCGCCACCGTACATTCGTCTCCTGGCGTAGATTTATTCACCACGACCGCAGCGGAACCGCCGCCAACATCCCGGCGACGCTCCGGTCGCCCCTTTTTTACCGGTACTGGCTTGACTTCCGGAAGGTTCTTCATGATTGGTTCAGGAAGCGACGATTCCAACCCGGTATCATGTCCGAGTTGACTCGGTCAGTCAAGCTTCCAATTGATTCACACAACAAAGTAGTAACCAAGGGCAAAAATAGATATTCTTCTTGTGCTGTTGTTGGGAACAGTGGGATTTTGCTGAATAGGGATTATGGAAGTGAAATTGATGCACACGAGGTTGTGATAAGGTTGAACAATGCTAGGGTTGATCACTTTGAGACCAAGGTTGGGAAGAAAACTAGCATTTCATTTATGAATAGTAACATTCTACATTTGTGTGCTAGAAGGGCAGGGTGTTTTTGTCACCCCTATGGTGACCACGTTCCGATTGTTATGTATATTTGCCAGGCCGTGCATTTCTTGGATTACACTGCGTGCAATGCTTCTCACAAGGCTCCTTTATTGGTCACTGATCCTAGGTTTGATGTGTTGTGTGCAAGGATTGTGAAGTATTATTCCTTGAAGAGGTTCGTGGAAGAGAGTGGGAAGGGCTTGGAGAAGTGGGGTGGGGATCACGATGGGGCTCTTTTTCATTACTCTTCTGGGATGCAAGCTGTGATGCTGGCTTTGGGTATTTGTGATAGGGTTAGCATTTTTGGGTTTGGGAAATCGGCTTCTGCCAAGCATCATTACCACACTAACCAGAAGGCTGAGCTTCATTTGCATGATTATGAGGCTGAGTATGCGTTTTATAGGGACCTTGTTGATGGACACAGGCCAATTCCCTTCCTTGAGGACAGGTTTAAGGTTCCTCCTGTTGTCATGTATCATTGA 1287 0.4903 MHNDTEEKDGSETETIKQIIDPFSSFPHIATVKPNFYTLPMKRTVRPLFALLLLLVFAATLTSRVVLRRGILSIELEYRVRIRNPPPPQLNDTLLHHAAVEIGEEKFKQEIQNLLDGNFGSHARHRTFVSWRRFIHHDRSGTAANIPATLRSPLFYRYWLDFRKVLHDWFRKRRFQPGIMSELTRSVKLPIDSHNKVVTKGKNRYSSCAVVGNSGILLNRDYGSEIDAHEVVIRLNNARVDHFETKVGKKTSISFMNSNILHLCARRAGCFCHPYGDHVPIVMYICQAVHFLDYTACNASHKAPLLVTDPRFDVLCARIVKYYSLKRFVEESGKGLEKWGGDHDGALFHYSSGMQAVMLALGICDRVSIFGFGKSASAKHHYHTNQKAELHLHDYEAEYAFYRDLVDGHRPIPFLEDRFKVPPVVMYH 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01045 428 PIRSF Sialyl_trans 321 410 IPR012163 GO:0006486|GO:0008373
Vian5g01045 428 PIRSF Sialyl_trans 41 269 IPR012163 GO:0006486|GO:0008373
Vian5g01045 428 PANTHER BETA-1,6-GALACTOSYLTRANSFERASE GALT29A 41 428 - -
Vian5g01045 428 Pfam Glycosyltransferase family 29 (sialyltransferase) 189 407 IPR001675 GO:0006486|GO:0008373
Vian5g01045 428 Gene3D Glycosyl transferase family 29 90 410 IPR038578 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g01045 173 257 Glycosyltransferase AT3G48820 31.461 4.56e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01045 K00786 - gmx:100816284 755.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01045 5 32112573 32113859 Vian5g01045 5 32112573 32113859 ECH