Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01038 ATGGACCAGCTTCCTGTAGAAGTGATTGGGAACATTCTGTCTCACTTGAGGGCTGCACGAGATGTGGTGATAGCCTCTGCAACATGCAGGAAATGGCGACAAGCGTGCTGCAAACACCTTCATACCCTCTCCTTCAGCTCCAAAGATTGGCCCATTTATCGAGATTTGACGACTACCCGTCTCGAGATTTTGATCACACAAACCATTTTTCAGACCTCAGGGTTGCAGGCTCTCTCCATTTTGATGGAAGATGTGGATGAATTCTCAGCTTCAACGGTTACTGCTTGGCTCTTGTACACCAGGGAAACTTTGAGGCAATTGCATTATAATGTCAAGACTATGCCTAATGTTAACATTCTTGAAATATGTGGCAGGCACAAGCTGGAAATACTAGATCTTGCTCATAACTCCATAGTGGGGGTTGAGCCTAATTATCAGCGATTCCCTTGCTTGAAGTCTCTTTCCCTGAGTTATGTCAGTATATCTGCATTGGATCTGAATCTTCTGGTATATGCATGTCCGAAGATTGAAGCTTTGGAGCTTGTGAATCCTGAGATTGCAATGTCTGATGCACAGGTGACTGTTGAATTGAGTAGTTCAACGCTGAAGAAGGTGTATGTAGAATCAATCAGTTTGGACAAGTTTATATTGGAGGCTGACGGGCTTGAGACCTTGCACTTGAAAGATTGTGCACTTGAGTTCTTTGAACTCGTTGGCAAGGGAGCCTTGAAGCATTTTAAGATTGATGATGTTAGTGTTATACATCTTGATATTGGCGACACAGTTGAGGATCTTGAGACAGTGGATATCAGCAACTTCACAATTATATGGCCAAAGTTTTACCAGATGATTTCAAGATCATCAAATCTAAAGAGGCTTCGACTTTGGGATGTGATGTTTGACGACGAGGATGAGGTTGTGGATATGGAAACAATTGCAACTTGCTTTCCTTATCTGAGCCATTTATCTCTGAGTTATGATGTGAGATATGGAGTTCTTCACTATGGTTTACAAGGCTCTTCCTATCTAGAGAATGTTCTTGTCTTGGAGCTTGGTTGGACTGTGATCAATGATCTCTTCTCCCATTGGGTTGATGGGCTGCTTAAGCGATGTCCCAATCTCAAGAAATTGGTCATTCATGGAGTTGTTTCTGAGGCAAAGTCTCATGAAGAATGCCAGATGTTAGCCAGTTTCACCACAGCAATGGTTGACATGATGAGGAGATACATAAATGTAGATCCACATTTTAAGTATGAATAG 1260 0.423 MDQLPVEVIGNILSHLRAARDVVIASATCRKWRQACCKHLHTLSFSSKDWPIYRDLTTTRLEILITQTIFQTSGLQALSILMEDVDEFSASTVTAWLLYTRETLRQLHYNVKTMPNVNILEICGRHKLEILDLAHNSIVGVEPNYQRFPCLKSLSLSYVSISALDLNLLVYACPKIEALELVNPEIAMSDAQVTVELSSSTLKKVYVESISLDKFILEADGLETLHLKDCALEFFELVGKGALKHFKIDDVSVIHLDIGDTVEDLETVDISNFTIIWPKFYQMISRSSNLKRLRLWDVMFDDEDEVVDMETIATCFPYLSHLSLSYDVRYGVLHYGLQGSSYLENVLVLELGWTVINDLFSHWVDGLLKRCPNLKKLVIHGVVSEAKSHEECQMLASFTTAMVDMMRRYINVDPHFKYE 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01038 419 CDD F-box_SF 2 37 - -
Vian5g01038 419 Gene3D Ribonuclease Inhibitor 112 399 IPR032675 -
Vian5g01038 419 Pfam F-box-like 2 39 IPR001810 GO:0005515
Vian5g01038 419 Gene3D - 1 44 - -
Vian5g01038 419 SMART fbox_2 4 45 IPR001810 GO:0005515
Vian5g01038 419 SUPERFAMILY RNI-like 73 381 - -
Vian5g01038 419 PANTHER F-BOX PROTEIN-LIKE 2 381 - -
Vian5g01038 419 SUPERFAMILY F-box domain 1 56 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01038 Vian-Chr5 32021652 32022911 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01038 - - vun:114169858 810.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01038 5 32021652 32022911 Vian5g01038 5 32021652 32022911 ECH