Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01037 ATGGCTGAAAAGCATCATCTCATTCTCCTTCTTCTCTGCGCGACTCTGCAATTCTCTTCACCTTCACCCTCCGATCACTTTTACAATGTCGGAGAACTTGTCCCATTTTTTGTCAACAAAGTGGGACCCTTCAACAACCCCAGTGAGACCTATGAATACTATGATTTGCCATTCTGCGCCCCAGTCCCAATTGTCAAAAAGAGAGAGTCCCTGGGTGAAGTTCTCAATGGTGACCGTTTGAGCAATGCTTTGTATGAGTTCAAGTTCAGAGAGGACAAGATTGATGCGACCTTGTGCCCAAAGAAGCTTACAGTTGATGAAATTGGCTTCTTTAAGCGCGCTATAGACCGTGAATTTTACTTCCAATTTTACCTGGATGATCTTCCATTCTGGGGGTTCATTGGGAAACTAGAAGAAGATAGGTGGACTCCTGGTGGAGGAGGACAAAACTATTACCTTTTTACACATGTTCAGTTTAATGTTCTTTACAATGGGAATCAAATCATACAAGTAAATGCATTTGGCGATCCAAATCGTGCTGTATATATTACTAAAGATGTTGATGTCGATGTTAAGTTCACTTATTCTGTTACCTGGAATGCCACTAAAATACGTTTTGAGAACAGGATGGATAGATACTCAAGGGCTTCGTTGATGTCTGTGCATCAGCAAGTTCATTGGTTCTCGTTCATCAACTCAATTGTCATCATTTTGCTTTTGAGTGGTTTGCTTGCCCTGCTTTATATGCGACATCTGAGGAATGATTTGAAAAAGTACTCTGATGCAAATGAAGAAGATAGAGAGGTTGGTTGGAAGTGCCTCCATGGCGATGTATTCAGACCTCCTCCTAACTCATCCTTACTTTTTGCTGTTGTTGGAACTGGTACCCAATTGCTAATCTTGATTTGTGTATTGCTGTTTCTAGCACTTATTGGCACCCTCTATCCCTACAATCGTGGAGGACTGTTAAATTGGCTTGTCATGCTGTATGCTCTTTTTTCTGTATTTGCTGGCTACACTGCAGCATCCTTCCATGGCCAGTATGCTGAGAATGGATGGGAAAGGACGGTTGGTCTTGCAGGGGTTCTTTACACTGGACCAGTGTTTGTTGCAGCCTCTATCCTCAACATAGTTGCAATCTCTTACAGGGCTACAGTTGGACTCCCATTTGGCTCCATTATTGTTATTCTTGTTTTATTAACATTTCTAGCAGTCCCATTGCTTGCATTTGGTGGAGTGATCGGATACCGATTTAGATCTAAATTTCAAAGCCCCTCTGCTGCAAAGAGACACCCAAGAGAGATTCAACAGCTTGCTTGGTACAGGAGAACGCCATTTCTAATGTTTATTGGGGGTCTTGTGCCTTTTAGTGCAATTGTTCTGCAACTACACCAAGTGTATGCTAGTATGTGGGGCTACAAAATATACACTCTTCCTAGCATTTTGTTCGTCACCTTCATTCCTGTCATTGTGATCATTGCACTTGTCAGTATTGGCTTGACATACATTCAACTATCTGTGGAAGACCATGAATGGTGGTGGAGGTCAGTGCTGTGTGGTGGCTCAACAGCCATTTTCATGTTTGGGTATTCTATCTACTTCTATGTGAGATCAAATATGAGTGGATTCTTGCAGCTATCCTTCTTTATTGGCTATAATGCATGCCTATGCTATGCTTTCTTCCTAATATTTGGTGCAATCAGTTTCAGAGTTTCATTTCTCTTTGTTCGCTTTATATACCACAATGTTAAAAGAGAGTAA 1761 0.4157 MAEKHHLILLLLCATLQFSSPSPSDHFYNVGELVPFFVNKVGPFNNPSETYEYYDLPFCAPVPIVKKRESLGEVLNGDRLSNALYEFKFREDKIDATLCPKKLTVDEIGFFKRAIDREFYFQFYLDDLPFWGFIGKLEEDRWTPGGGGQNYYLFTHVQFNVLYNGNQIIQVNAFGDPNRAVYITKDVDVDVKFTYSVTWNATKIRFENRMDRYSRASLMSVHQQVHWFSFINSIVIILLLSGLLALLYMRHLRNDLKKYSDANEEDREVGWKCLHGDVFRPPPNSSLLFAVVGTGTQLLILICVLLFLALIGTLYPYNRGGLLNWLVMLYALFSVFAGYTAASFHGQYAENGWERTVGLAGVLYTGPVFVAASILNIVAISYRATVGLPFGSIIVILVLLTFLAVPLLAFGGVIGYRFRSKFQSPSAAKRHPREIQQLAWYRRTPFLMFIGGLVPFSAIVLQLHQVYASMWGYKIYTLPSILFVTFIPVIVIIALVSIGLTYIQLSVEDHEWWWRSVLCGGSTAIFMFGYSIYFYVRSNMSGFLQLSFFIGYNACLCYAFFLIFGAISFRVSFLFVRFIYHNVKRE 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01037 586 Coils Coil 249 269 - -
Vian5g01037 586 Pfam Endomembrane protein 70 50 543 IPR004240 GO:0016020
Vian5g01037 586 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 17 584 IPR004240 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01037 Vian-Chr5 32001250 32004109 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g01037 9 586 Miscellaneous Gene Families AT2G01970 48.722 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01037 K17085 - gmx:100818419 1026.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01037 5 32001250 32004109 Vian5g01037 5 32001250 32004109 ECH