Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01033 ATGGCAACCTTGTCAAGTGTGAAGGTTTCCTCCCACTGCATGTTTCAAATTCCAAGCAAAAATCAATTCACTTTTGGCACCACAGTGAAGTGTCCTTCTCTTGGGTCTATAAAGAGTGTTTCGAGAACTTTTGGCTTGAAGTCATCCTCTTCATTTAGAGTGACTGCCATGGCTTCTTACAAGATTAAGCTGATCGGCCCAGATGGAAAAGAGAACGAATTTGAAGCCTCAGATGATACTTACATCCTAGATGCAGCAGAGGATGCTGGAGTTGAACTTCCTTACTCGTGCCGTGCGGGAGCTTGCTCTACTTGTGCTGGGAAGATTGTTTCTGGTTCAGTGGATCAGTCTGATGGCTCATTCCTTGATGACAACCAAATGAAGGAAGGCTTTCTACTTACCTGTGTCTCCTATCCAACTGCAGACTGTGTAATTGAAACTCACAAGGAAGGAGAGCTCTACTGA 465 0.4452 MATLSSVKVSSHCMFQIPSKNQFTFGTTVKCPSLGSIKSVSRTFGLKSSSSFRVTAMASYKIKLIGPDGKENEFEASDDTYILDAAEDAGVELPYSCRAGACSTCAGKIVSGSVDQSDGSFLDDNQMKEGFLLTCVSYPTADCVIETHKEGELY 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01033 154 Gene3D - 57 154 IPR012675 -
Vian5g01033 154 ProSiteProfiles 2Fe-2S ferredoxin-type iron-sulfur binding domain profile. 60 151 IPR001041 GO:0051536
Vian5g01033 154 NCBIfam ferredoxin [2Fe-2S] 58 154 IPR010241 GO:0009055|GO:0022900|GO:0051537
Vian5g01033 154 ProSitePatterns 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 97 105 IPR006058 GO:0051537
Vian5g01033 154 Pfam 2Fe-2S iron-sulfur cluster binding domain 67 140 IPR001041 GO:0051536
Vian5g01033 154 PANTHER FERREDOXIN 31 154 - -
Vian5g01033 154 FunFam Ferredoxin 58 154 - -
Vian5g01033 154 CDD fer2 62 146 IPR001041 GO:0051536
Vian5g01033 154 SUPERFAMILY 2Fe-2S ferredoxin-like 55 153 IPR036010 GO:0051536
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01033 Vian-Chr5 31941845 31942309 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01033 K02639 - gmx:100785611 272.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01033 5 31941845 31942309 Vian5g01033 5 31941845 31942309 ECH