Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01029 ATGGCGGTGCGGGCCACAGTGTCTCGTTTCCCAATGGACACGGATGCGCGCGAGGCCTCCGGCCTCCTCTGGGGAGTCGCCGTCACGCCTTTCGCCGCCGCCGACGAGAACAACCGCGCTCCGTCGTACGGTTCCGGAGGAGACATTTTGCCGCGCTGCGAGAATTGCTGGGCCTACTTCAACACCTACTGCGAGCTCGAGCAGTGGGCCTGGTCCTGCTCCCTCTGCGGCAACCTCAACGGCCTCTCCTCCGACGCCATCGACCGCTACTCTCGTCCTCAGTCCTGCGCCGAGATGATGTCCTCCTTCGTAGATCTCGAATTGCCTACGCAGGAATCGGCAGAGGAAGCCGCAATGCTGGCGTGTCCGGTATATGTTGCTGCTGTTGACTTGTCCTCTTCTGAGGAGTTTCTAGAACTTATCAAAAGTGCACTGCTGGCTGCTCTGGAAGCTCTTGCTCCTGGTTCACTTTTTGGGCTTGCTACCTTCAGCCACAAACTAGGATTGTATGATGTTCAAGGTCCAATACCTGTTGTGAAAAATGTTTTCATCCCTCCTGATGCAGATGGAACCTTGCCTATTGAGCTGGAAGATGTCATGCCTTTGTTACAATTTCTGGCTCCTGTGGACACTTGTAAGGACCGCATTGCATCTGCACTTGAAACACTTAGACCAACAACTTCATGGGAGAGAACCACGGCCGCAGGTCAAGGACTGGATGGAGTTCTGATAGGTGGACGTGGTTTTGGGATGGCAATGGAAGCTCTCTGCAATTACCTTGGATCTGAATATGGGAATACTTTTGCTTTAGCTAGAGTCTTTGCCTTCTTGTCTGGTCCCCCTGATTATGGAGCTGGACAATTGGACACAAGACGATATGGTGAGCAATATGCAAGCAAAGGAGAGGATGCTGATCGTGCTTTACTCCCAGAGCAGACACCCTTCTATAAAGATCTGGCTGCTGTTGCTGTTCAAGCAGGTGTATGTGTTGACATATTTGCTGTAACAAATGAGTACACTGATTTGGCATCCCTAAAGTTTCTGAGTATTGAAAGTGGGGGTTCCTTATTTTTGTACACAAGTACTGAGGATTCAACATTGCCACAGGACATGTATCGAATGCTGAGTAGACCATATGCTTTTGGTTGTGTCCTGCGACTAAGAACCTCAACTGAATTTAAACCTGGCAATTCTTATGGTCACTTCTTTCCAGATCCACAGTATGAAAATGTTCAACACGTGATATGCTGTGATTCTTATGCTACATACGCTTACGACTTTGTATTTGAGAACAACATTGGATTTTCAAGAACTAAATCAGATGTTCCTACGATTCAGATTGCATTTCAGTACTCAGTTGGAGTTCCTCCTCAGGAACTTTCTAATTCAGGAGGGGTTTCTACAAATAGAAGAACCAAGCATTCCCTTCAGCGTCGGCTAAGGATCCGAACATTGGAATTTGGTGTTGCTCAGAACATTCATGAACTTTATGATAGCTGTGATCCTGAAGTTGTTCTATCTCTGCTGGTTCACAAGGTTATATTAGCTTCTTTGGAGGAAGGAGTTAGGGAGGGTAGAATTTTGCTTCAAGAATGGCTAGTGATCCTCACAGCTCAGTACAACGATGCATATAAGCTTATTCAGTATAGCAATGGAAGTTCCTTAAGATCTCAGATTGACGTTGCATTGTCTCAATGTCCTCAATTGCAGCCCCTACCACGCCTAATTTTTGCTCTCCTTCGGAATCCTCTTCTCCGCTTCCATGAAGAAGGGGTTCATCCTGACTATCGCATATATCTTCAATGCCTTTTCAGCATGTTGGAACCCAGTTCTCTTCATCGTGCTGTGTATCCTGTGTTGACATCATATGCTACTCCAGATAAACAAGCATATCCTCGCCATTCATTGAGTCGCGCCGCACTGATTACCAGCGGCAGTCCGATATTTTTCCTTGATGCATTCACAATTCTTATTGTGTTTTACTCTTCCACTGCAGACCCGACCATTCCTTTTCCTCCACCCCATGATTGTTTATTAAGGACTACAATCAACAAATTGAAGCAAGATAGATGCATCACTCCCAAACTCCTCTTTATTCGAGGAGGGCAGGACGATGCGTCAATTTTTGAGAACTTTCTGATCGAAGAGCAGGATGTTGATGGAAGTGGTCTAACCAGTGTGATGGGTTTTGTTTCTTTCCTAGAAGATGTTACACAAAAAGTTTTGGAGTTCGTGAAATAG 2241 0.4645 MAVRATVSRFPMDTDAREASGLLWGVAVTPFAAADENNRAPSYGSGGDILPRCENCWAYFNTYCELEQWAWSCSLCGNLNGLSSDAIDRYSRPQSCAEMMSSFVDLELPTQESAEEAAMLACPVYVAAVDLSSSEEFLELIKSALLAALEALAPGSLFGLATFSHKLGLYDVQGPIPVVKNVFIPPDADGTLPIELEDVMPLLQFLAPVDTCKDRIASALETLRPTTSWERTTAAGQGLDGVLIGGRGFGMAMEALCNYLGSEYGNTFALARVFAFLSGPPDYGAGQLDTRRYGEQYASKGEDADRALLPEQTPFYKDLAAVAVQAGVCVDIFAVTNEYTDLASLKFLSIESGGSLFLYTSTEDSTLPQDMYRMLSRPYAFGCVLRLRTSTEFKPGNSYGHFFPDPQYENVQHVICCDSYATYAYDFVFENNIGFSRTKSDVPTIQIAFQYSVGVPPQELSNSGGVSTNRRTKHSLQRRLRIRTLEFGVAQNIHELYDSCDPEVVLSLLVHKVILASLEEGVREGRILLQEWLVILTAQYNDAYKLIQYSNGSSLRSQIDVALSQCPQLQPLPRLIFALLRNPLLRFHEEGVHPDYRIYLQCLFSMLEPSSLHRAVYPVLTSYATPDKQAYPRHSLSRAALITSGSPIFFLDAFTILIVFYSSTADPTIPFPPPHDCLLRTTINKLKQDRCITPKLLFIRGGQDDASIFENFLIEEQDVDGSGLTSVMGFVSFLEDVTQKVLEFVK 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01029 746 Gene3D - 30 101 - -
Vian5g01029 746 Pfam Sec23/Sec24 helical domain 501 613 IPR006900 GO:0006886|GO:0006888|GO:0030127
Vian5g01029 746 SUPERFAMILY Helical domain of Sec23/24 501 617 IPR036175 GO:0006886|GO:0006888|GO:0030127
Vian5g01029 746 SUPERFAMILY beta-sandwich domain of Sec23/24 3 500 - -
Vian5g01029 746 PANTHER SEC24-RELATED PROTEIN 3 739 - -
Vian5g01029 746 Pfam Sec23/Sec24 trunk domain 123 374 IPR006896 GO:0006886|GO:0006888|GO:0030127
Vian5g01029 746 SUPERFAMILY vWA-like 123 377 IPR036465 -
Vian5g01029 746 Gene3D Sec23/Sec24 helical domain 471 630 - -
Vian5g01029 746 Gene3D von Willebrand factor, type A domain 122 379 IPR036465 -
Vian5g01029 746 SUPERFAMILY Zn-finger domain of Sec23/24 48 111 IPR036174 GO:0006886|GO:0006888|GO:0008270|GO:0030127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01029 - - gmx:100807557 1435.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01029 5 31907067 31917212 Vian5g01029 5 31907067 31917212 ECH