Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01012 ATGAGACGAATTCAGCTTCCGGAGCCGCCGAGCCCTACCGCCCGGAGAGGAACTCCGGACATATTCGAGTCCGGAGTTCACACGTTCGTGCGACGCGCCGTTGTAATCGGCAACGGCTCCGCCGCTTCGGAGAATCAGAGCGTCGGATTGGTTCGTGCCCTTGGCCTCGCCGATAAGCACGTCTTATATCGTGTTACCAGACCAAAAGGGGGAATTAATGATTGGCTTCAATGGCTTCCAGTCTCGCTCCATAAGAAAATAGATTATATAGTAAGAATGATTCAAGGTTATTCTCAGCTTATGTTGAAATCTCAGGAAAAGAAGCTTATGCCTTTACCTTCAGAAAATGGTGTCAGTGCAGGCTTGTTAGCTGTCTTGGAAGCTGATGCAAAGCAGATAGTTAGTTTTGCTCGTGAAACTTATGAGAAGGAGGGACCATTGTTGGTTGTTGCATGTGGAAGAGACACCATTTCTACTGCAAGTTCCATAAAACGCTTAGCATCGGAGAATGTGTTTGTAGTTCAGATACAACATCCAAGATCGATTTTGAATCGCTTTGACATGGTAATTGCACCCAAGCATGATTATTATCCTTTGACTCCAGAAGGACAAAAAAAGATTCCTCGGTTTCTTCGGAGTTGGATAACTCCGCGTGATCCTCCAGATAGTCATGTGGTTCTTACTATGGGGGCGTTACATCAAGTAGATTTCAGTTCAATACGTAGTGCTGCTGCTACTTGGCATGACGAGTTTTCAAATGTTCCGAGGCCCTTGCTTGTGGTCAACGTAGGAGGACCAACAAGGAACTGTCGTTATGGTGTAGACCTTGCCAAGCAGTTAGCAGTTTCTTTGCTCAGTGTTCTAGCTAGTTGTGGCAGTGTTAGGATATCCTTTTCGGAGAGGACACCACAGAAGGTGTCCAGTATCATAGTAAAAGAACTTGGGAATAACCCAAAAGTTTATATCTGTGATGGGCAAGGACCTGACCTGCACATGGGCCATTTAGCTTGGGCAGACTCATTTGTTGTCACTGCAGATTCAGTTAGCATGATAAGTGAAGCTTGCAGCACTGGGAAGCCTGTTTATGTTATGGGCGTTGAGCGATGCAGATGGAAGTTCAATGAATTTCACAAATCTTTGAGAGAGATGGGAGTTGTTCGTCCTTTTACAGGTTCCGAGGATATATCAGAAAGTTGGAGTTATCCACCCCTTTCCGATACCGCTGATGCCGCCAAAAAAGTTCATGAAGCGCTTGCTGCCCGAGGGTGGAAATTGAAGGTATAG 1284 0.4587 MRRIQLPEPPSPTARRGTPDIFESGVHTFVRRAVVIGNGSAASENQSVGLVRALGLADKHVLYRVTRPKGGINDWLQWLPVSLHKKIDYIVRMIQGYSQLMLKSQEKKLMPLPSENGVSAGLLAVLEADAKQIVSFARETYEKEGPLLVVACGRDTISTASSIKRLASENVFVVQIQHPRSILNRFDMVIAPKHDYYPLTPEGQKKIPRFLRSWITPRDPPDSHVVLTMGALHQVDFSSIRSAAATWHDEFSNVPRPLLVVNVGGPTRNCRYGVDLAKQLAVSLLSVLASCGSVRISFSERTPQKVSSIIVKELGNNPKVYICDGQGPDLHMGHLAWADSFVVTADSVSMISEACSTGKPVYVMGVERCRWKFNEFHKSLREMGVVRPFTGSEDISESWSYPPLSDTADAAKKVHEALAARGWKLKV 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01012 427 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 137 366 - -
Vian5g01012 427 PANTHER OS02G0535700 PROTEIN 1 426 IPR009367 -
Vian5g01012 427 Pfam Mitochondrial fission ELM1 43 418 IPR009367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01012 Vian-Chr5 31656184 31661209 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01012 - - gmx:100777791 777.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00601 11 6120636 6125188 Vian5g01012 5 31656184 31661209 PCT