Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01011 ATGACTCGTGTGTTGGTTCAGAGGGGTTCTTCCGGCGGTGGTTCTTCTTCTAACGCAAACCGGAGCGGTGGGTCGTCTACCAGTGGTGGGTCGTCTACCAATCCCTCGGCGCGTGCAGAGGCGCAGGTTTTGGTCTCGCCGGACATTACTGATGAGGTGGTTGTTGGAGATGACGTTTTGGAGAGTGATGATAAGGGGAAGAGTGAGGAGAGTATTCATTTTGAGCAGGCTGACGGGTCTTGTGATGATGGTGTGCCTACAACTGTTGTTGAAAGTGATATAAGGGAAGAGTTTGTGAAGGGATTAGGTGGATTGAGAATTGGTGAAAGGAATGTTGCAGTGAGTGAGGGTGCGAGTGGGGATTCTTCTTCCCTACCTGTTGGCGGTTCTTCGTGTCCCCCGCCTCCTCCGGTGCCGCCTCCCAAGCCTTCTTTGCCAGGGAATTTGAATGCAAGGAGGAGTGTGGCCGGGAGTTTGATTTCAGGTAGTGTGGGATCGTCGAGGAGAACATCTGCATGGCCGGTTGTTCCGGCCAGGACTTCACCTGCTGGGTCTAGGCCGTCTTCTCCCCGGTCACATAATGAAAGTGAAGGGTACAATAGTGCTGATGAACAGAAGCCTTGCCTGGTTTCGTCTTATGATGATTTTGAAAGGGAGCGGCAGTTTGAAATTGACATCAGAAGGGCAAAAGGTTATGAAGTAAAAAAAATGATGGAGGATGGAAATTGTCTTTTCCGAGCGGTTGCAGATCAGGTGTACGGGGATTCCGAAGTGTATGATTTGGTCAGACAAATGTGTATAGATTATATGGAGCAAGAGAGAGATCACTTTTCTCAGTTTATAACTGAAGGGTTCACATCTTATTGCAAGAGAAAAAGAAGAGATAAGGTTTATGGAAACAATGTTGAGATTCAAGCCATGTGTGAAATGTATAATCGACCGATTCACATATACTCATACAGCGTAGAACCTATCAATATCTTTCATGGAAGTTACAACACTGACACACCACCAATTCGATTGAGTTATCATCATGGAAACCATTACAATTCCCTTGTTGACCCACGGCGCTTGGCAATTGGTGCTGGTCTTGGGTTCAGCAGTCTTCGTGGGACAAATGTTGACAAAGATCAAGTCAAAGATGCTATTAAATCTCAACAGGACGAACAGATTAATAACGCACTTTTAGCTGAGGGTCGGTTTTACTCTGATCTTGAGCTGACAGAAAAGGAAATTGAACGAATGGTGATAGAAGTTTCTCGAGCGGAATACCTTTCAGATAGTAGTACATTTAAGCAACAGCTGGGTGACAGAGAATCGTCTACCTCAAACGCTGAACCATCGTCATCTGGAGCAAGATCATCAGGCACTGGGCGGAAGACAGAAGATGGGAAAGAGCATGGTTGTGATCTGAGCAGTGGGATGCAAATTTTACTGTCGATGGGATTCACATACATCCAAGCGATTGAAGCTTACAGCATATTTGGGGATGATGTTGATTCCATGGTTTGTTACCTCTTAGAAACCGGCAGTAGCAGCAGACGTAAGGGCAAGGCCACTGAATGA 1566 0.4636 MTRVLVQRGSSGGGSSSNANRSGGSSTSGGSSTNPSARAEAQVLVSPDITDEVVVGDDVLESDDKGKSEESIHFEQADGSCDDGVPTTVVESDIREEFVKGLGGLRIGERNVAVSEGASGDSSSLPVGGSSCPPPPPVPPPKPSLPGNLNARRSVAGSLISGSVGSSRRTSAWPVVPARTSPAGSRPSSPRSHNESEGYNSADEQKPCLVSSYDDFERERQFEIDIRRAKGYEVKKMMEDGNCLFRAVADQVYGDSEVYDLVRQMCIDYMEQERDHFSQFITEGFTSYCKRKRRDKVYGNNVEIQAMCEMYNRPIHIYSYSVEPINIFHGSYNTDTPPIRLSYHHGNHYNSLVDPRRLAIGAGLGFSSLRGTNVDKDQVKDAIKSQQDEQINNALLAEGRFYSDLELTEKEIERMVIEVSRAEYLSDSSTFKQQLGDRESSTSNAEPSSSGARSSGTGRKTEDGKEHGCDLSSGMQILLSMGFTYIQAIEAYSIFGDDVDSMVCYLLETGSSSRRKGKATE 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01011 521 MobiDBLite consensus disorder prediction 182 196 - -
Vian5g01011 521 Gene3D - 214 365 - -
Vian5g01011 521 MobiDBLite consensus disorder prediction 430 468 - -
Vian5g01011 521 PANTHER OTU DOMAIN CONTAINING PROTEIN 175 358 - -
Vian5g01011 521 Pfam OTU-like cysteine protease 240 349 IPR003323 -
Vian5g01011 521 CDD OTU_plant_OTU6-like 228 354 - -
Vian5g01011 521 MobiDBLite consensus disorder prediction 113 204 - -
Vian5g01011 521 FunFam OTU domain-containing protein 5 213 365 - -
Vian5g01011 521 MobiDBLite consensus disorder prediction 154 174 - -
Vian5g01011 521 MobiDBLite consensus disorder prediction 129 146 - -
Vian5g01011 521 SUPERFAMILY Cysteine proteinases 219 355 IPR038765 -
Vian5g01011 521 MobiDBLite consensus disorder prediction 430 457 - -
Vian5g01011 521 ProSiteProfiles OTU domain profile. 232 355 IPR003323 -
Vian5g01011 521 MobiDBLite consensus disorder prediction 59 77 - -
Vian5g01011 521 MobiDBLite consensus disorder prediction 1 87 - -
Vian5g01011 521 MobiDBLite consensus disorder prediction 1 40 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01011 K12655 - gmx:100809162 802.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01011 5 31648485 31653013 Vian5g01011 5 31648485 31653013 ECH