Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01005 ATGCCATGCCCTTATCCCGAATCCTCATGTGAATCTCGCACACCCGGGATTATCGGGTACCTCAAACTCCTTCACACAATTCTCATCACCATGCCCTCGTGTCATAACACCAACAACAACCTCAACCTCAAAGAAGGTCTCACACAGAACCACAGCAAGACTAGGAAACGAGGTTGCTCCTCCTCCTCTTCCTCATCTCTTGTCAGAAGATACCGTTTCAAGAGGGCCATTTTGGTTGGGAAGAAAGGAGGGTCCAGCACCCCAGTTCCCATGTGGAAGACCAAAACAACTTCTCCTTCTCTTCCTACACACCACACCAAGCCTTTGCATTCTTCTGCCTCCATGTTACCCTCCTCCAAGGACAGGGAGCTTTCTGTGTCAGCCAGGAAACTCGCTGCTACACTCTGGGAAATCAATGATTTGCCTCCTTCCCGGCTCAAGAAGGAGTTCGAGGTTGATCAAATGAGAGGCTGCAAGGAGAAGGGTAGAGGCAGAGAGAAAGGTTCGGGGTTGTCCAGATCGGGCTTTTTGCGGTCACAGATGTCAGATCCATCGCATAGTCCTGCCTCTGAGAGGATGAAGGGTCTTGAAGGGGATAGCTGCAAAAGAAGAGTGTCGGGGTTTTCTCATCAGCTTCTGTCGGGTGATTACTATTTGGATGCTCTGGATGCTCACAGCAATGATAATTTAATTGAGGAGGTGGAAAATCAGTTAAAAAGCGAGAAGAATCGTGGCAAACGCAGTGGTGGTGTTAAGAACCGTCTGAAGGAAGCTAGAAGTGGATTATCTACATCGAAGAAGCTTCTGAAGGTGTTAAATCAAATGTGCCTTAGAGAGCAGCAAGCATCAAGCATGCCCCTTGTCTTGGCTTTGGGGAGTGAGCTTGATCGAGTGTGCCACCAAATTGATCAACTGATCCAAGAACAGCGTTCAAACCAGAACGATATGGAGTATGTCATGAAGCATTTCGGAGAAGAGAAGGCTGTTTGGAAAAGAAGAGAACGAGAAAGGGTTCATGATGCCATAAAGAATGTGGCAGAAGAGCTTGCGGTGGAGAAGAAGTTGAGAAGGCAAACTGAACGGTTGAACAAGAAGATTGCCAAAGAGATGGCCAGTGTAAAAGCTTCCCATTTGAAAACATCCAAAGAGCTTGAAAGGGAGAAGCGTGCAAAGGAGATTCTGGAGCAAATTTGTGATGAACTGGCTAGAGGCATCGGGGAAGATAGAGCACAGGTGGAGGAACTGAAAAGGGAATCGGCTAAAGTTCGCGAGGAGGTGGAGAAGGAAAGGGAAATGCTTCAGTTAGCTGATCTCTTACGCGAAGAGAGAGTCCAGATGAAGCTTTCAGAGGCTAAGTATCAGTTTGAGGAGAAGAATGCTTTCCTGGAAAAGCTGAGGAATGAGCTTGAGGACTATGTGAGGACTAAAGATGGACAAAATGAGGATGTTTCTCCAGAATGTAAAAATATCAAGGATCTTGAGTCTTATTTCAACAATGTCTGTAGGGGATTCCAGAATGCAGAGAAAGAGGATGATTCAGATGTTGAAAACGATGTAGGACAAGGAAGAGATGATGACTCAGATGACAGTGATCTCCATTCAATTGAGTTGAACATGGATGATGCCAGCAAAGGCTACAAGTGGAGTTTTGCGAGTGAAAATGATGGTCAAGACAAGAGATTTTCAATTGAAAAAGAAAGTATAGGGAGAAAGTCTTTCTCTGAGAAAATTCAGTGGGGAAGTATTTGCTTCAACAAGGGAACTTCAAGTGGTAGGAAGAGGGATTTTTCCATAAATATTCAGGAAGTTTCTGATCATTTTGATCCTGATAGGTCGATTGAATTTCTCTCACAAGCTCGGATACAAGAAGATAAGGATGAAACTCAAAGCAAAAGGTCAATTAAGGGGCTCCAAGACTCTATCTCATGTGTTAATTCTGATAAGATAACTGGTAGACTATTAACTTTGCAGTGTGCTGGTGGAGAAGCTGGGGAAAAAGGTCTTGCCCTGGAGGATGACAATTTGAAGCAAGAAATTGCAGGAGAAAAGTCTTGA 2055 0.4482 MPCPYPESSCESRTPGIIGYLKLLHTILITMPSCHNTNNNLNLKEGLTQNHSKTRKRGCSSSSSSSLVRRYRFKRAILVGKKGGSSTPVPMWKTKTTSPSLPTHHTKPLHSSASMLPSSKDRELSVSARKLAATLWEINDLPPSRLKKEFEVDQMRGCKEKGRGREKGSGLSRSGFLRSQMSDPSHSPASERMKGLEGDSCKRRVSGFSHQLLSGDYYLDALDAHSNDNLIEEVENQLKSEKNRGKRSGGVKNRLKEARSGLSTSKKLLKVLNQMCLREQQASSMPLVLALGSELDRVCHQIDQLIQEQRSNQNDMEYVMKHFGEEKAVWKRRERERVHDAIKNVAEELAVEKKLRRQTERLNKKIAKEMASVKASHLKTSKELEREKRAKEILEQICDELARGIGEDRAQVEELKRESAKVREEVEKEREMLQLADLLREERVQMKLSEAKYQFEEKNAFLEKLRNELEDYVRTKDGQNEDVSPECKNIKDLESYFNNVCRGFQNAEKEDDSDVENDVGQGRDDDSDDSDLHSIELNMDDASKGYKWSFASENDGQDKRFSIEKESIGRKSFSEKIQWGSICFNKGTSSGRKRDFSINIQEVSDHFDPDRSIEFLSQARIQEDKDETQSKRSIKGLQDSISCVNSDKITGRLLTLQCAGGEAGEKGLALEDDNLKQEIAGEKS 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01005 684 Coils Coil 398 432 - -
Vian5g01005 684 Coils Coil 224 244 - -
Vian5g01005 684 MobiDBLite consensus disorder prediction 89 119 - -
Vian5g01005 684 MobiDBLite consensus disorder prediction 511 525 - -
Vian5g01005 684 MobiDBLite consensus disorder prediction 173 187 - -
Vian5g01005 684 MobiDBLite consensus disorder prediction 157 198 - -
Vian5g01005 684 Coils Coil 455 482 - -
Vian5g01005 684 MobiDBLite consensus disorder prediction 507 533 - -
Vian5g01005 684 PANTHER GB|AAF24581.1 64 642 IPR043424 -
Vian5g01005 684 MobiDBLite consensus disorder prediction 84 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01005 Vian-Chr5 31546478 31549356 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01005 - - var:108340557 1280.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01005 5 31546478 31549356 Vian5g01005 5 31546478 31549356 ECH