Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01004 ATGGCGCTCGTAACAACAGAGCCAACCATAAACGAAGGGCCTCTGTTCGCCGAAGTTGACATGGCTTCGGATTTCAACGCCCCCACTGTTCGAGCCACCGTTATTCAAGCTTCCACCATCTTCTACGACACTCCAGCCACTCTAGATAAGGCAGAAAGGTTGTTGGGTGAAGCCGCAGGGCATGGGTCCCAGCTTGTGGTGTTTCCAGAAGCGTTTGTGGGAGGGTACCCGCGTGGTTCCGATTTTGGGGTTTCTATTGGAAATCGCACGGCCAAGGGAAGAGAAGAGTTTCGCAAGTATCATTCTGCAGCCATTGATGTGCCTGGTCCTGAAGTTGATAGATTAGCAACAATGGCAGGGAAGTATAAAGTACATTTAGTGATGGGTGTGATAGAGAGGGATGGCTACACACTTTATTGCACCGTTCTATTCTTTGATTCTCAAGGTCATTACCTGGGAAAGCACAGGAAAATCATGCCAACGGCATTGGAGCGGATTATCTGGGGATTTGGGGATGGATCAACCATTCCCGTGTTCGAAACTCCCATTGGAAAGATAGGTGCTGCCATTTGCTGGGAAAACAGGATGCCACTATTAAGGACTGCAATGTATGCCAAAGGTATAGAGATATACTGTGCTCCTACAGCTGATGCCAGGGATGTGTGGCAAGCATCAATGACCCACATTGCACTTGAAGGTGGATGTTTTGTTTTGTCAGCAAACCAGTTCTGTAGGAGAAGGGATTACCCTCCCCCTCCAGAGTATGTTTTTGCTGGCACAGAAGAGGACCTGACACCTGATTCTGTTGTATGTGCTGGGGGTAGTGTCATTATATCACCATCAGGGGCTATTCTGGCTGGACCAAATTATGATGGGGAGGCACTAATCTCAGCAGACCTTGATCTAGGAGAAATAGCAAGAGCTAAGTTCGATTTTGATGTGGTTGGACACTATTCAAGGCCAGAAGTGCTTAGCTTGACTGTAAAGGACCATCCAACGAATCCAGTCACTTTTACATCAACATCAAAAAAAATTGAGGACAACACCAAGTAG 1053 0.4729 MALVTTEPTINEGPLFAEVDMASDFNAPTVRATVIQASTIFYDTPATLDKAERLLGEAAGHGSQLVVFPEAFVGGYPRGSDFGVSIGNRTAKGREEFRKYHSAAIDVPGPEVDRLATMAGKYKVHLVMGVIERDGYTLYCTVLFFDSQGHYLGKHRKIMPTALERIIWGFGDGSTIPVFETPIGKIGAAICWENRMPLLRTAMYAKGIEIYCAPTADARDVWQASMTHIALEGGCFVLSANQFCRRRDYPPPPEYVFAGTEEDLTPDSVVCAGGSVIISPSGAILAGPNYDGEALISADLDLGEIARAKFDFDVVGHYSRPEVLSLTVKDHPTNPVTFTSTSKKIEDNTK 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01004 350 Gene3D - 18 314 IPR036526 -
Vian5g01004 350 FunFam Bifunctional nitrilase/nitrile hydratase NIT4B 20 314 - -
Vian5g01004 350 SUPERFAMILY Carbon-nitrogen hydrolase 28 329 IPR036526 -
Vian5g01004 350 ProSiteProfiles Carbon-nitrogen hydrolase domain profile. 30 302 IPR003010 GO:0006807
Vian5g01004 350 CDD nitrilases_CHs 30 328 IPR044149 GO:0003824
Vian5g01004 350 ProSitePatterns Nitrilases / cyanide hydratase signature 1. 62 77 IPR000132 GO:0003824
Vian5g01004 350 Pfam Carbon-nitrogen hydrolase 31 309 IPR003010 GO:0006807
Vian5g01004 350 ProSitePatterns Nitrilases / cyanide hydratase active site signature. 187 200 IPR000132 GO:0003824
Vian5g01004 350 PANTHER NITRILASE 14 344 IPR044149 GO:0003824
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01004 K13035 - gmx:100778110 686.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01004 5 31538396 31545221 Vian5g01004 5 31538396 31545221 ECH