Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00981 ATGGAAAATCATGGTGGGAAGAAGAGAGTGGTGGTCGTAGGAGGGGGTATTGCGGGTTCTCTCGTCGCTAAATCTCTCCAATTCACTGCCCATGTTACCCTCATTGATCCGAAGGAATATTTTGAGATTACATGGGCAAGTTTGAGATCAATGGTTGAGCCTTCTTTTGCAGAGAGATCTGTGATCAATCATAGAGATTACCTTGTCCATGGCAATATCATTACGTCCAGTGCCGTCAATGTTACAGAAACTGATGTGATCACCGCCGATGGCCATAAAATTGCCTTTGACTATCTTGTTATTGCCACTGGCCATGCAGATGACGTCCCCAAAATTAGGAGGGACAGACTTCATCAGTTCGTAGAACACAACGAAAGGATAAGATCTGCTCGTTCCATCATGATTGTTGGAGGAGGTCCTACTGGTGTGGAACTTGCTGCAGAGATAGCTGTTGATTATCCACATAAGAAGATTACGATAGTGCACAAAGGACCTAGGCTACTGGATTTCGTAGGGACAAAAGCTGCGGATAAGACTCTAAAATGGTTGGAATCAAGAAATATAGTGGTGAAATTAGAGCAATCAATTGACTTGAAGGAATTATCATATGAAAACAAGACATATCGAACTTCAAATGGAGAGACCTTTGAAGCAGATTGTTATTTCTTATGTTTAGGGAAACCACTTGCATCAGCATGGCTTGAGGAAACTATGTTGAAGCATGACATGGATGAGGAAGGAAGGATTAAGGTAGATGAAAAGTTGAGAGTCATTGGTAGGAGAAACATTTTTGCAATTGGAGACATTACAGATATTCCAGAAATCAAGCAAGGATTTGCAGCACAACAGCATGCAGAAGTGGTTGTGAAGAACTTGAAGGTGATGATAGATGGAGGAAGAGATTGTGGTCAATATAGGATGGAAAATTACAAGCCACAGATGCCAATGGCAATCGTTTCACTTGGGAGGAAAGATGCTGTGGCACAACTACCATTAATGACAGTCATTGGAAGAGTTCCTGGGTACATCAAATCTGGAGATTTATTTGTTGGTAGAACAAGGAGACAAATGGGACTGGATTCTCATACTGTGCATGCTTGA 1101 0.4178 MENHGGKKRVVVVGGGIAGSLVAKSLQFTAHVTLIDPKEYFEITWASLRSMVEPSFAERSVINHRDYLVHGNIITSSAVNVTETDVITADGHKIAFDYLVIATGHADDVPKIRRDRLHQFVEHNERIRSARSIMIVGGGPTGVELAAEIAVDYPHKKITIVHKGPRLLDFVGTKAADKTLKWLESRNIVVKLEQSIDLKELSYENKTYRTSNGETFEADCYFLCLGKPLASAWLEETMLKHDMDEEGRIKVDEKLRVIGRRNIFAIGDITDIPEIKQGFAAQQHAEVVVKNLKVMIDGGRDCGQYRMENYKPQMPMAIVSLGRKDAVAQLPLMTVIGRVPGYIKSGDLFVGRTRRQMGLDSHTVHA 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00981 366 PRINTS FAD-dependent pyridine nucleotide reductase signature 10 29 - -
Vian5g00981 366 PRINTS FAD-dependent pyridine nucleotide reductase signature 248 270 - -
Vian5g00981 366 PRINTS FAD-dependent pyridine nucleotide reductase signature 96 114 - -
Vian5g00981 366 PRINTS FAD-dependent pyridine nucleotide reductase signature 132 150 - -
Vian5g00981 366 PANTHER APOPTOSIS-INDUCING FACTOR 1 6 359 - -
Vian5g00981 366 Pfam Pyridine nucleotide-disulphide oxidoreductase 8 284 IPR023753 GO:0016491
Vian5g00981 366 SUPERFAMILY FAD/NAD(P)-binding domain 6 272 IPR036188 -
Vian5g00981 366 FunFam apoptosis-inducing factor 2 6 357 - -
Vian5g00981 366 Gene3D - 6 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00981 Vian-Chr5 31263180 31265987 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00981 10 276 EF-hand Containing Proteins AT4G28220 24.118 3.82e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00981 K22745 - gmx:100785294 600.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g00981 5 31263180 31265987 Vian5g00981 5 31263180 31265987 ECH