Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00980 ATGGAAAAAGACAGGAAGAGAGTGGTGATTCTTGGAGGTGGCGTTGCAGGATCCGTCGTCGCTAGATCTCTTCAATTCCATGCCCGTGTCACCCTCGTTGATTCGAAGGAATATTTTGAGATTCCATGGGCAAATTTGAGGTCAATGGTTGAGCCATCTTTTGCAGAGAGAACGTTGATCAATCACAGAGATTACCTTACCAATGCCGATATCGTTACGTCCGAAGCCGTCAATATTACAGAAACTGAAGTGTTGACTGCAGATGGCCGTCGAATTGGCTATGATTATCTTGTTATTGCCACTGGTCGTGCAGATTCTGTCCCCAAAACTAGGAGTGAAAGACTTAATCAGTTCAATGAAGAGAATCGAAAGATAAAATCTGCTCGTTCCATTCTGATTATTGGAGGAGGTCCCACTGGTGTGGAACTTGCCGGAGAGATAGCTGTTGATTTTCCAGATAAGAAGGTTATACTAGTACACAAAGGGTCGAGGCTGCTGGAGTTTATAGGGGCAAAAGCTGGGCATAAGGCTTTAAAATGGTTGAAATCAAAGAATGTTGTGGTGAAACTAGACCAAAGAGTTAACTTGAATGGATTCACAGATGGACAAAAGATATATCGAACTTCAATAGGAGAGACAATTGAAGCAGATTGTCATTTTTTATGCATGGGAAAACCACTTTCTACTGCATGGCTGAAGGAAACTGTGTTGGAGAATGATTTGGATTCTCAGGGAAGGATCAAGGTAGATGAAAAATTAAGAGTCAATGGACGGGGCAACATTTTTGCAATAGGAGATATTACAAATATTCCAGAAATCAAGCAAGGGTTTTTGGCACAGCAGCAAGCTGAAGTTGTTGTGAACAACCTGAAGGTGATAATACACGGAGCAAGAGAATGTAAGATGGAAACTTACAAGCCACATTCAGCAATTGCAATAGTTTCACTTGGGAGGAAAGAAGCAGTGGCACAGTTACCATTCTGGACAATCACTGGAAGAATTCCAGGATTCATTAAGTCTGGAGATTTGTTTGTTGGTAGAACAAGAAGACAAATGGGACTCAGTTATGATATTGTAAAAGCTTGA 1086 0.4134 MEKDRKRVVILGGGVAGSVVARSLQFHARVTLVDSKEYFEIPWANLRSMVEPSFAERTLINHRDYLTNADIVTSEAVNITETEVLTADGRRIGYDYLVIATGRADSVPKTRSERLNQFNEENRKIKSARSILIIGGGPTGVELAGEIAVDFPDKKVILVHKGSRLLEFIGAKAGHKALKWLKSKNVVVKLDQRVNLNGFTDGQKIYRTSIGETIEADCHFLCMGKPLSTAWLKETVLENDLDSQGRIKVDEKLRVNGRGNIFAIGDITNIPEIKQGFLAQQQAEVVVNNLKVIIHGARECKMETYKPHSAIAIVSLGRKEAVAQLPFWTITGRIPGFIKSGDLFVGRTRRQMGLSYDIVKA 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00980 361 PRINTS FAD-dependent pyridine nucleotide reductase signature 130 148 - -
Vian5g00980 361 PRINTS FAD-dependent pyridine nucleotide reductase signature 8 27 - -
Vian5g00980 361 PRINTS FAD-dependent pyridine nucleotide reductase signature 246 268 - -
Vian5g00980 361 PRINTS FAD-dependent pyridine nucleotide reductase signature 94 112 - -
Vian5g00980 361 Pfam Pyridine nucleotide-disulphide oxidoreductase 6 272 IPR023753 GO:0016491
Vian5g00980 361 SUPERFAMILY FAD/NAD(P)-binding domain 4 291 IPR036188 -
Vian5g00980 361 PANTHER APOPTOSIS-INDUCING FACTOR 1 3 354 - -
Vian5g00980 361 FunFam apoptosis-inducing factor 2 4 352 - -
Vian5g00980 361 Gene3D - 4 347 - -
Vian5g00980 361 SUPERFAMILY FAD/NAD(P)-binding domain 126 224 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00980 Vian-Chr5 31243555 31245858 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00980 K22745 - gmx:100818210 592.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g00980 5 31243555 31245858 Vian5g00980 5 31243555 31245858 ECH