Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00979 ATGGCGGAGAAGAAAGTGGTCATCGTAGGAGGTGGTGTTGCCGGTGCCAGCCTAGCAAAAAATATACAAAATCAAGCCAACGTTACCCTTATCGATCCGAAGGAATATTTTGAGATTCCATGGGCAAGTTTGAGGGGATTGGTTGAGCCATCTTTTGCTGAAAGGATAGTGATCAACCATAGAGAGTACTTCAAAAAGGGTGACCTTGTTGTATCCAGTGCAGTCAACATAACTGAAACTGAAGTGTTTACTGCAGATGGCCAGCAGATTGCCTATGACTATCTTGTTATTGCCACTGGCCACGCAGAACCTATTCCCAAAACCAGGACTGAAAGACTTGACCAATACAAAGCAGAAAATGCAAAAATCAAATCTGCAAGTTCAATTTTGATTGTTGGGGGAGGTCCAACTGGTGTTGAGCTTGCAGCAGAGATTGCTGTTGATTTTCCTGACAAAAAGGTCACTATAGTGCATAAAGGGGTAAGATTGCTGGAATACATTGGGCAAAAAGCATCAAGTAAGACTTTGAAGTGGCTCAAATCAAAGAAGGTTGATGTGAAACTAGAGCAATCTGTCGAAGTGAAATCCTCTTCGGAAGAAAATAAGACATATGAAACTTCAAATGGAGAGACTATAGAAGCAGATGCTCATTTTCTATGCATAGGGAAACCAGTTGGTTCCACATGGCTTAGAGAAACACTTCTGAAAGATGACTTGGATGGTGATGGAAGGATCAAGGTCGATGAAAACTTGAGAGTGAAGGGCAGGAGCAACATTTTTGCAATTGGAGATATTACAGATGTTCAAGAAATCAAACAAGGGGTGTATGCAAGTGGTCATGCTCAATTGGTTGCCAAGAACCTAAAGTTATTGATAGAAGGAGGAGGCAAAGAGAACAAATTGGGAACATACAAGGCGCAACCACCAATCTCTATAGTCTCATTAGGGAGAAAAACTGCAGTAGCACAGTTCCCATTCATTACAGTGCTTGGAAGGCTTCCTGGCATGATCAAATCTGGAGATTTGTTTGTGGGGAAAACCAGAAAGGATTTAGGACTTGAACCTAATGTTAAGAAGTCTTAA 1083 0.4155 MAEKKVVIVGGGVAGASLAKNIQNQANVTLIDPKEYFEIPWASLRGLVEPSFAERIVINHREYFKKGDLVVSSAVNITETEVFTADGQQIAYDYLVIATGHAEPIPKTRTERLDQYKAENAKIKSASSILIVGGGPTGVELAAEIAVDFPDKKVTIVHKGVRLLEYIGQKASSKTLKWLKSKKVDVKLEQSVEVKSSSEENKTYETSNGETIEADAHFLCIGKPVGSTWLRETLLKDDLDGDGRIKVDENLRVKGRSNIFAIGDITDVQEIKQGVYASGHAQLVAKNLKLLIEGGGKENKLGTYKAQPPISIVSLGRKTAVAQFPFITVLGRLPGMIKSGDLFVGKTRKDLGLEPNVKKS 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00979 360 PANTHER APOPTOSIS-INDUCING FACTOR 1 3 353 - -
Vian5g00979 360 SUPERFAMILY FAD/NAD(P)-binding domain 1 288 IPR036188 -
Vian5g00979 360 PRINTS Pyridine nucleotide disulphide reductase class-II signature 254 272 - -
Vian5g00979 360 PRINTS Pyridine nucleotide disulphide reductase class-II signature 124 148 - -
Vian5g00979 360 PRINTS Pyridine nucleotide disulphide reductase class-II signature 216 237 - -
Vian5g00979 360 PRINTS Pyridine nucleotide disulphide reductase class-II signature 5 27 - -
Vian5g00979 360 FunFam apoptosis-inducing factor 2 2 351 - -
Vian5g00979 360 Pfam Pyridine nucleotide-disulphide oxidoreductase 4 280 IPR023753 GO:0016491
Vian5g00979 360 PRINTS FAD-dependent pyridine nucleotide reductase signature 6 25 - -
Vian5g00979 360 PRINTS FAD-dependent pyridine nucleotide reductase signature 214 230 - -
Vian5g00979 360 PRINTS FAD-dependent pyridine nucleotide reductase signature 244 266 - -
Vian5g00979 360 PRINTS FAD-dependent pyridine nucleotide reductase signature 128 146 - -
Vian5g00979 360 Gene3D - 1 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00979 Vian-Chr5 31239040 31241203 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00979 6 272 EF-hand Containing Proteins AT4G28220 24.085 3.47e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00979 K22745 - gmx:100817682 611.683