Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00971 ATGACCAACAACGACAACATCAACAATGTCAACAACAAGCTCCAAGGCCAAAGCCTGCTATATTCTTCTTCTTCCTCTGTGAGGAGAGAAGAAGATACGATCATGCAGAAGCAGGGCATCATCACCATTTTGGACTCAAACACAGACACAATTTCTTCTGCTTCTTCTCTGCGAAGAACTCTCTCGGCAGACATGTCCTCAAAGAATTGGCTCTCTCAAACCATTGCTCCTTCCGAAGAACTCGTGCATGCCAAAACCATTGCTCACTCGGAAGATGATGAGAGCAATAACAAGGAGCTTGACGATGAAGCTGAAAGAGAGAGGCTCGAGATTTGGAGTTCCATCCAACGGAACAAGAAGGAGGAGCAAGAGAAATCAGGGTCATTTGATACGTGGAACTCAATCATATCCCTGAAAGGAAAAGATGAAATCTCGAAATCTCTTCCTGCGTCACCTTATGTTCATCCTCTTGTGAAAAGGTCCAAGAGTTGTTTGAGTGAGAAGAGCCTCCAAATCTGCACAGAGAGTCTCGGATCCGAGACCGGCTCTGATGGGTTGGTCTCTTCTTACTCTTCTTCTGAGACAGGGAATACAGAGGAAGAAGAGAAAGTTGTAGAACCAACAATCCAAGAAGAAGAAGAAGAAGAAGATTTGAACAATTATGCTTCAGTGGTGGCTACAAAGAAGGCTTCATCACCAACACGTGCTTTCCCTCCTCCACTCCCTTCACTCTCTCATCAACAAGCTGGTCCTTCACTTCACATGCGTTCACGCCGTGACAATGGAAGGTTGGTTCTAGAAGCTGTTTCTGTCCCTTCTCACAACAATTTCAGCATTCAGCGTCAAGGTGGTCGCCTCGTCCTCTCTTTCTCCAATCACCGAGAGGAGGAGGAGGAAGAAGAAGAGAATAACGGTTGTCCGGAGCAAGAATACTTAGAAGAGTTGGAGTCTGAGGAAGAAGAATACTCTTTTGGGACGAAACCACGAGTATCTTCCACTGGATTCAATTCCGGCTTCATGGAATATGAGAGTGTAATGGAGAAAGGACCCTTATTGTCTTGTGGGGTGACAAGTAATGTTCAAGGGTTGGCTTTGATGATGAATAATAAGAACAAGACAATCGGGGCTGTAAACAAGAATCCAAAGTGGTCGGAGAAGTTCAGTGAGATGACCAATTTTAATGATGTTAATGTGACACAATCGCTGCCTCCGATGCCAAGGGTGGCAAGGTTGATTCCATCAGCACCAGCGGTGGCTGCAGCTGCAGCTTCTTTCAATTTCAATGCTTATGAGTACTATTGGAGAACCAACTCTGCTCCATCGAAAAGTACGAGTGTTAAACTTAACCCACTTGACCAAAACAAAAAACATCATCAGAACCATCAAGAGAACATGAAGAGCAAGGTTGTTGTCTCCAGGGACATGAACAAGATGGTTCCAAGGGAGCAACAACAGGTGTTGGTTCTAAGAGGGAAGAATGGTGATTACTTGGTTCACAATCTGAAGAGTTGCAAGGATTCTAGAAGGTCGTTTATGTTCTGGGAACCCTATTGCATTGCCACCTCTTGA 1569 0.4487 MTNNDNINNVNNKLQGQSLLYSSSSSVRREEDTIMQKQGIITILDSNTDTISSASSLRRTLSADMSSKNWLSQTIAPSEELVHAKTIAHSEDDESNNKELDDEAERERLEIWSSIQRNKKEEQEKSGSFDTWNSIISLKGKDEISKSLPASPYVHPLVKRSKSCLSEKSLQICTESLGSETGSDGLVSSYSSSETGNTEEEEKVVEPTIQEEEEEEDLNNYASVVATKKASSPTRAFPPPLPSLSHQQAGPSLHMRSRRDNGRLVLEAVSVPSHNNFSIQRQGGRLVLSFSNHREEEEEEEENNGCPEQEYLEELESEEEEYSFGTKPRVSSTGFNSGFMEYESVMEKGPLLSCGVTSNVQGLALMMNNKNKTIGAVNKNPKWSEKFSEMTNFNDVNVTQSLPPMPRVARLIPSAPAVAAAAASFNFNAYEYYWRTNSAPSKSTSVKLNPLDQNKKHHQNHQENMKSKVVVSRDMNKMVPREQQQVLVLRGKNGDYLVHNLKSCKDSRRSFMFWEPYCIATS 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00971 522 MobiDBLite consensus disorder prediction 176 217 - -
Vian5g00971 522 MobiDBLite consensus disorder prediction 229 255 - -
Vian5g00971 522 Coils Coil 90 110 - -
Vian5g00971 522 Pfam Fantastic Four meristem regulator 236 290 IPR046431 -
Vian5g00971 522 PANTHER FANTASTIC FOUR-LIKE PROTEIN (DUF3049) 53 521 IPR021410 -
Vian5g00971 522 MobiDBLite consensus disorder prediction 176 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00971 Vian-Chr5 31055934 31057502 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00971 - - vra:106776294 712.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00633 11 6526836 6535915 Vian5g00971 5 31055934 31057502 PCT