Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00961 ATGACTCTGCTGCGAGGTCTTGCGATCTTCTTCCTCTTGGTTGCTCTCTACTGTGGGCTGGACCCCTTCCACCACAGCCCAATAGCCCATTTCCCGGAATTCCAGAGCAAGAGGGTGGACCTTCCCCCATGGTCGGACATTCCCACCGACCAAGACAAACACAATCTATTGCAGAAGTCCGAGATTAAGTTCCTGAACGAGGTGCAGGGACCAGAGAGCATTGCTTTCGATCCTCTTGGTCGTGGCCCTTACACTGGTCTTGCTGATGGAAGAATCGTCTTCTGGAACTCTCACTCTTGGCTTGACTTTGCCTATACCTCTCCCAATAGGTCGGAGATATGTAATCCAGTAGCATCTGCAACCCCATTTAGTTATGTGAAGACTGAGCATATCTGTGGAAGGCCTTTGGGGCTCAGATTTGACAAGAAAACAGGTGATTTGTTCATTGCAGATGCATATTTTGGGCTCTTGAAGGTGGGGCCTGAGGGTGGCTTAGCAACATCTCTTGTAACTGAGGCTGAAGGGATTCCACTGAAATTCACTAATGATGTTGATGTCGATGGGGAAGGGAATGTTTATTTTACAGAGAGCAGTGCTCATTATCAGAGGAGGAATTTCCTTCAACTGGTATTCTCTGGGGATGATAGTGGCAGGGTTTTGAAATACAACCTAGTCACTAAGGAAACCACTGTTCTTTTTAGGAACATTCAATTCCCAAATGGCATTACCTTAAGCAAGGATGGTTCCTTCTTTGTCTTGTGTGAAGGGGTTGTTGGCAGGTTACGTAAATACTGGCTGAAAGGAGAAAAGGCTGGGACTTCAGAGATTTTAGCCACTCTACCTGGATTTCCTGACAATGTGAGAGTCAATGAAGATGGTGATTTTTGGGTAGCTCTTCATTGTAGAAGGTATATGTATCCATACTATATGGGTCTGTACCCAAAGATAAGGAAAATCATACTCAAGCTTCCTATACCATTAAAATTTCATTACATGCTACAAATAGGAGGTCACCAACATGCAGTAGTTATGAAGTATAGTCCTGAAGGTAGAATATTGCAGATATTGGAGGACAGTGAGGGGAAAGTTGTTAGAGCGATAAGTGAAGTGGAGGAGAAGGATGGTAGACTATGGATAGGAAGTGTTCTCATGCCTTTTGTTGCAGTATACAACTTGAAATGA 1182 0.4442 MTLLRGLAIFFLLVALYCGLDPFHHSPIAHFPEFQSKRVDLPPWSDIPTDQDKHNLLQKSEIKFLNEVQGPESIAFDPLGRGPYTGLADGRIVFWNSHSWLDFAYTSPNRSEICNPVASATPFSYVKTEHICGRPLGLRFDKKTGDLFIADAYFGLLKVGPEGGLATSLVTEAEGIPLKFTNDVDVDGEGNVYFTESSAHYQRRNFLQLVFSGDDSGRVLKYNLVTKETTVLFRNIQFPNGITLSKDGSFFVLCEGVVGRLRKYWLKGEKAGTSEILATLPGFPDNVRVNEDGDFWVALHCRRYMYPYYMGLYPKIRKIILKLPIPLKFHYMLQIGGHQHAVVMKYSPEGRILQILEDSEGKVVRAISEVEEKDGRLWIGSVLMPFVAVYNLK 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00961 393 Gene3D - 54 393 IPR011042 -
Vian5g00961 393 FunFam Putative strictosidine synthase 54 393 - -
Vian5g00961 393 Pfam Strictosidine synthase-like, N-terminal 59 94 - -
Vian5g00961 393 Pfam Strictosidine synthase 182 269 IPR018119 GO:0009058|GO:0016844
Vian5g00961 393 SUPERFAMILY Calcium-dependent phosphotriesterase 40 392 - -
Vian5g00961 393 PANTHER STRICTOSIDINE SYNTHASE-RELATED 7 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00961 Vian-Chr5 30887793 30891255 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00961 - - gmx:100803331 707.212