Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00951 ATGGCCAACCAAAACTCGTTCCCCCTCTATGAGAAACACCGGTACAAGCACACTTATAAAAGGGTAACGGAGAGCTTGCTCTTAGTCCTTCTCTTGTTGCAGCTTGGTTACCGAGCTATCTCTGTCAGCAACTACTCATTCCCTTGGTTTCTTGCTTTTGTCTGCGAATCATGGTTCACCATCTCTTGGTTTTTCACCCTCTCCACTCAGTGGAGTCCAGCAGTAATCAAAACCTACCCACAACGTCTCTTACAAAGTGTGCAGGAGGTTCCAGCAGTGGATATGTTTGTGACAACAGCAGACCCTGTTCTTGAACCACCTATTATCACAGTGAACACTGTGTTGTCTCTGTTAGCACTTGATTACCCACCTCAGAAGCTTGCTTGTTATGTCTCTGACGATGGTTGTTCACCCCTAACCTTCTACGCTCTTCAAGAAGCCTCCAAATTTGCAAAGTTTTGGGTACCATTCTGTAAGAAGTATGATGTGCAAGTTAGAGCTCCCTTCAGATACTTCTCTGCCAAACCAGAAGTCTCAACAGCCAGTAACACACCAGAATTCAAACAAGAATGGTTACAGATGAAGAATATGTACAATGATCTTAGCCAAAAAATAGAATTGGAAGCATCCCAAAAATCAAATCCAAGTCATGGAGACTTTGCTGTTTTCTCAAACACTGAGAGGACAAATCATCCATCCATAATCAAGACAAGAGTCTCTGGGTTGATAACCAATGCTCCCTTTATGCTGAACGTGGACTGTGACATGATCGTAAATAATCCAAAGATTGTTCATCATGCATTGTGCATTTTACTCGATCCCAAAGGACAAAAAGAAGTTGCATTTGTTCAATGTCCCCAACAATTCTACGCTACACTGAAGGACGATCCTTTTGGAAACCAGATGGCAATTTTGATGAAGTACATGGCAGCAGGATTAGCTGGGCTGCAAGGGCCTTTCTACGGGGGAACAAACTGCTTCCATAGAAGAAAAGTTATTTATGGTCTTTCTCCAGATTACGTTGACAAGGGAAGGACAGATTCACCAAATGCTGTTAATATTGCAAAGGTTATTGAGGCAGCAAGCCAAGTTGCTGGTTGTGGATATGAATATGGCACAGGATGGGGCAAACAGGTGGGTTGGATATATGGATCAGTAACAGAGGACGTGCTTACTGGACTGACAATCCATGAAAGAGGGTGGAGATCAGAATTTTGTACACCAAACCCAATTGCCTTCACGGGCTTTGCTCCAGGAGGTGGCCCAACTGCAATGGTCCAACAGAAGAGATGGGCCACAGGGTTTCTGGAGATCTTTGTAAGCGAGTACTGTCCTATTTTTGGCACCCTTTTTCATAAGCTTACTTTGAGGCAGTGCATAGCATATATGTGGATTCTCAACTGGGGGCTGCGAACAGTGTTTGAACTATGCTATGCATGTCTTCTTGCGCACTGCATCATCACCAACTCCAATTTATTGCCACAGGACCTTGGCATATGTATTCCAGTTTCTGTTATAGTAATTTACAAGGTATACACTGTATCAGAATATTTAGCAGCAGGGTTATCAATAAAAGCATGGTGGAATAATCAAAGGATGTCAATAATAACACCCATGAATGCTGGTTTCTGTGCTTTTCTCAGCGTCCTACTTAAGATTTTAAGAATATCTGAAACTGTATTCGACATAACAAAGAAAGATTTACCCCCAACAACTGATGTTGTAGATGACAAGGATGCTGGCAGGTACACCTTCGATGAATCCCTAGTTTTCTTGCCAGGCACTACCATTTTGCTGTTGCATTTCTCAGCAATAACTATCAAGTTATTAGGAATGCAACCAGTGGTGCCAATTAGCAAGAACGAGTGTGGAATTGTTTTTGGTGGTGATGTTGAGGCTATTGATCATAGATGGAACCAACATGGTCTTGGAGGGGATAATGTTAGAAACAGTTGCAGAACTTTGCATCCTGGTTCTATCAGTTTGCTGCATTGGAGTGGGAAAGGGAAGCCATGGACAAGGCTTGATGCTAAGAAGCCTTGCTCAGTGGACTTTCTCTGGGCACCTTACGATCTCTATATACCTTCTCAGCATAAGAGAATTGCTACTGCTACAATGCATTCGCCATTTTAG 2133 0.4285 MANQNSFPLYEKHRYKHTYKRVTESLLLVLLLLQLGYRAISVSNYSFPWFLAFVCESWFTISWFFTLSTQWSPAVIKTYPQRLLQSVQEVPAVDMFVTTADPVLEPPIITVNTVLSLLALDYPPQKLACYVSDDGCSPLTFYALQEASKFAKFWVPFCKKYDVQVRAPFRYFSAKPEVSTASNTPEFKQEWLQMKNMYNDLSQKIELEASQKSNPSHGDFAVFSNTERTNHPSIIKTRVSGLITNAPFMLNVDCDMIVNNPKIVHHALCILLDPKGQKEVAFVQCPQQFYATLKDDPFGNQMAILMKYMAAGLAGLQGPFYGGTNCFHRRKVIYGLSPDYVDKGRTDSPNAVNIAKVIEAASQVAGCGYEYGTGWGKQVGWIYGSVTEDVLTGLTIHERGWRSEFCTPNPIAFTGFAPGGGPTAMVQQKRWATGFLEIFVSEYCPIFGTLFHKLTLRQCIAYMWILNWGLRTVFELCYACLLAHCIITNSNLLPQDLGICIPVSVIVIYKVYTVSEYLAAGLSIKAWWNNQRMSIITPMNAGFCAFLSVLLKILRISETVFDITKKDLPPTTDVVDDKDAGRYTFDESLVFLPGTTILLLHFSAITIKLLGMQPVVPISKNECGIVFGGDVEAIDHRWNQHGLGGDNVRNSCRTLHPGSISLLHWSGKGKPWTRLDAKKPCSVDFLWAPYDLYIPSQHKRIATATMHSPF 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00951 710 SUPERFAMILY Nucleotide-diphospho-sugar transferases 107 442 IPR029044 -
Vian5g00951 710 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 237 608 - -
Vian5g00951 710 Pfam Cellulose synthase 238 343 IPR005150 GO:0016020|GO:0016760|GO:0030244
Vian5g00951 710 Pfam Cellulose synthase 93 211 IPR005150 GO:0016020|GO:0016760|GO:0030244
Vian5g00951 710 Pfam Cellulose synthase 349 608 IPR005150 GO:0016020|GO:0016760|GO:0030244
Vian5g00951 710 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 197 340 IPR029044 -
Vian5g00951 710 Pfam Glycosyl transferase family 8 625 674 IPR002495 GO:0016757
Vian5g00951 710 SUPERFAMILY Nucleotide-diphospho-sugar transferases 625 693 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00951 Vian-Chr5 30781902 30796338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00951 1 613 Glycosyltransferase AT2G32530 40.426 6.71e-178 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00951 - - gmx:100500469 1028.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g00951 5 30781902 30796338 Vian5g00951 5 30781902 30796338 ECH