Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00949 ATGTTGCGCGTAGCTCCCAAATTCTTCACCGCCGCCCCGCTTCGGACCGTTTCACTCTTTGCATGTCGCTTCTCACTCCGTTCTATCGCTGACTCAGCTCCTTTCAACAAAATCCGCATTCAAAGAGATGATGACACTGCATTTGATGCATATGTTGTTGGCAAAAACAACGCTCCTGGAATTGTTGTGCTCCAGGAGTGGTGGGGTGTGGATTTCGAAATTAAAAACCATGCTGTGATGATTTCTCAACTCGGTCAGGGATTCAAAGCTCTTATTCCAGATCTATACAGAGGAAAGGTTGGTCTGGATGTTGCAGAAGCACAACATTTGATGAATGGTCTTGATTGGCAAGGCGCTGTGAAAGATATTCATGCTTCAGTTAACTGGCTTAAGGCAAATGGTTCAGCCAAGGCTGGTGTTACTGGATTTTGTATGGGGGGTGCACTTGCTATTGCAAGCTCAGTCTTGGTTCCAAATGTTGATGCTGCTGTAGCTTTCTATGGAGTTCCTTCCTCTGAGCTTGCAGACCCTGCCCAAGCCAAGGCTCCTGTTCAAGCTCATTTTGGAGAGCTGGATAATTTTGTTTGTTTTTCAGATGTTACGGCAGCCAAGGCCTTGGAGGAGAAGCTGAAGGCAGCTGGAGTTGCTCATGAGGTACACATATATCCTAACAATGGACATGCATTCATGAACAGGTCTCCTGAAGGAATCAAGAGGAGGAAGAGCATGGGAATGCCAGACGAAGATGAAGCTGCAGTTCAGCTGGCATGGTCTCGTTTCCAGTCATGGATGACACATTACTTAACTGGCTAA 813 0.4662 MLRVAPKFFTAAPLRTVSLFACRFSLRSIADSAPFNKIRIQRDDDTAFDAYVVGKNNAPGIVVLQEWWGVDFEIKNHAVMISQLGQGFKALIPDLYRGKVGLDVAEAQHLMNGLDWQGAVKDIHASVNWLKANGSAKAGVTGFCMGGALAIASSVLVPNVDAAVAFYGVPSSELADPAQAKAPVQAHFGELDNFVCFSDVTAAKALEEKLKAAGVAHEVHIYPNNGHAFMNRSPEGIKRRKSMGMPDEDEAAVQLAWSRFQSWMTHYLTG 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00949 270 Gene3D alpha/beta hydrolase 30 268 IPR029058 -
Vian5g00949 270 PANTHER CARBOXYMETHYLENEBUTENOLIDASE-RELATED 40 268 - -
Vian5g00949 270 SUPERFAMILY alpha/beta-Hydrolases 38 268 IPR029058 -
Vian5g00949 270 Pfam Dienelactone hydrolase family 48 267 IPR002925 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00949 Vian-Chr5 30742285 30751119 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00949 K01061 - gmx:100799250 496.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g00949 5 30742285 30751119 Vian5g00949 5 30742285 30751119 ECH
Vian11g00662 11 6912732 6915548 Vian5g00949 5 30742285 30751119 PCT