Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00940 ATGTTGCAATTACTCTACACTGCGATTTTCAGCGAAATGCTTCTGATTCTCACCCTAGTTTTTAAGACCCCTCTCAGAAAACTGGTCATCATTTCCCTCGATCGGGTCAAACGCGGCCGTGGCCCCATCGTTGTGTCCACCGTGGGCGCCACATTGGTGGTGGTTCTCTCTTCCAGCCTCTACAGCATGGCCAAGATCCAGCAACGCATCCTCGAGGCCGGTATACTCAACCCCACCGACCAAGTTCTTATGTCCAACCACATGCTCGAAGCCTCTCTCATGGGGTTTTTGTTGTTCCTCTCTCTGATGATTGATAGATTGCATCACTACATAAGAGAGCTTCGTTTACTCAGAAAGGCCATGGAAGCTATTAAGAAACAAAGCCGAAGTTTTGAAGATGACAAAAATGGTAATACAGAGGAACTGAAAGCATTGACAGAAGAAATTGCCACATTGAAGTCCAAAATTAAGAAACTGGAATCTGAATGTGAGACAAAAGGACATGAGGCTAAGTCTTTGGAAACTGAAGTAGAAGCTCATAAAAAGCAGTCGGAGGGTTTCCTTATGGAGTATGATCGCCTGTTGGAAGACAATCAGAGTCTTCGGAGTCAGTTACAGGCCCTTGAGAGCTCTTTGCAATCCTCATAA 648 0.4552 MLQLLYTAIFSEMLLILTLVFKTPLRKLVIISLDRVKRGRGPIVVSTVGATLVVVLSSSLYSMAKIQQRILEAGILNPTDQVLMSNHMLEASLMGFLLFLSLMIDRLHHYIRELRLLRKAMEAIKKQSRSFEDDKNGNTEELKALTEEIATLKSKIKKLESECETKGHEAKSLETEVEAHKKQSEGFLMEYDRLLEDNQSLRSQLQALESSLQSS 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00940 215 Coils Coil 107 176 - -
Vian5g00940 215 Gene3D - 138 201 - -
Vian5g00940 215 PANTHER BCR-ASSOCIATED PROTEIN, BAP 2 202 IPR008417 GO:0005783|GO:0006886|GO:0016020
Vian5g00940 215 Coils Coil 191 211 - -
Vian5g00940 215 FunFam B-cell receptor-associated protein 29 138 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00940 Vian-Chr5 30617920 30622425 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00940 K14009 - gmx:100820199 315.849
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00666 11 6953396 6954960 Vian5g00940 5 30617920 30622425 PCT