Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00931 ATGGGGTGCTCCATGAGAGTGTGTAGTGTCTTATTTTTGACAGTGTTGCTAGTGGCATTTGCAAGAGGGGAGGACCCTTATAGGTTTTACACTTGGAATGTCACATATGGAGACATTTATCCTCTTGGTGTTAAACAACAGGGGATTTTGATAAACTGGCAATTTCCAGGGCCACAAATTGAGGCCGTGACCAATGATAACTTGATCATCAATGTTTTCAATAGCTTGGATGAACCTTTCCTCTTATCTTGGAATGGAGTGTTGCAGAGGAGAAACTCATGGCAGGATGGAGTGTATGGTACCAATTGTCCAATTCCACCAGGGCAGAACTTCACTTATGTTCTTCAAGTGAAGGATCAAATTGGTAGCTACTTCTACTACCCTTCTCTTGCATTCCACAAGGCAGCAGGAGGTTATGGTGGATTCAAAATTGCGAGCCGCCCCGGGATTCCAGTGCCTTTCTCTCCTCCGGCGGGAGAGTTCACCATATTGGCCGGAGACTGGTACAAGAGAAATCATACAGATTTGAGGGCAATTTTAGATGGTGGAAGTGACCTTCCCTTCCCTGATGGACTTATCATCAACGGACGCGGTTCCAATGCCTACACATTCACAGTTGATCAAGGCAAGACATACAGATTCAGGATTTCAAATGTGGGTCTCACAACTTCAATCAATTTCAGAATCCAAGGTCATAAAATGACAATTGTTGAGGTGGAAGGGACCCACACTCTCCAGAACATTTATGATTCACTTGATGTTCATCTGGGCCAGACTTACTCTGTGTTGGTTACGGCTGATCAACCACCCCAAGACTACCTTATTGTTGTCACAACACGATTTACCTCTCAAGTGTTGAATGCTACCTCCATTTTTCGTTACAGTAATTCTGGAGGAAGTGTTACTGGCCTTTTTCCTTGGGGGCCAACTATTCAAGTTGATTGGTCTTTAAACCAAGCTCGCTCTCTTAGGAGGAATTTGACAGCAAGTGGGCCAAGGCCTAATCCACAAGGATCATACCATTATGGTTTGATAAACACAACTCGTACAATTAGACTTCAAAATTCTGCTCCAGTTATCAATGGCAAACAGAGATATGCTGTGAATAGTGTGTCCTTCATACCTGCTGATACACCACTTAAACTGGCTGATTACTACAAGATCCAAGGGGTGTTCTCTCTTGGAAGTATCTCTGACAACCCCACTGGTGGTGGTGGTTACCTTCAAACTTCTGTCATGGAAGCCGATTTCCGTGGCTTTCTGGAGGTTGTGTTTGAGAATACTGAAGACACTGTGGAATCTTGGCACATTGACGGCCACAGTTTCTTTGTAGTAGGAATGGATGGAGGACTATGGTCACAAGCAAGCAGGCTTGGTTACAATTTAAGAGATACAGTTTCTCGTTCCACAGTTCAGGTTTATCCCAAGTCATGGACTGCACTGTACATGCCTTTGGACAATGTGGGAATGTGGAATGTGAGATCTGAGAATTGGGTTCATCAGTATTTGGGCCAGCAATTTTATCTGAGGGTTTATTCTCCTGCAAATTCGTGGAGAGATGAGTATCCAATTCCAAGCAATGCTCTGAGGTGTGGCAAAGCTGTGGGTCACTATTAA 1617 0.4409 MGCSMRVCSVLFLTVLLVAFARGEDPYRFYTWNVTYGDIYPLGVKQQGILINWQFPGPQIEAVTNDNLIINVFNSLDEPFLLSWNGVLQRRNSWQDGVYGTNCPIPPGQNFTYVLQVKDQIGSYFYYPSLAFHKAAGGYGGFKIASRPGIPVPFSPPAGEFTILAGDWYKRNHTDLRAILDGGSDLPFPDGLIINGRGSNAYTFTVDQGKTYRFRISNVGLTTSINFRIQGHKMTIVEVEGTHTLQNIYDSLDVHLGQTYSVLVTADQPPQDYLIVVTTRFTSQVLNATSIFRYSNSGGSVTGLFPWGPTIQVDWSLNQARSLRRNLTASGPRPNPQGSYHYGLINTTRTIRLQNSAPVINGKQRYAVNSVSFIPADTPLKLADYYKIQGVFSLGSISDNPTGGGGYLQTSVMEADFRGFLEVVFENTEDTVESWHIDGHSFFVVGMDGGLWSQASRLGYNLRDTVSRSTVQVYPKSWTALYMPLDNVGMWNVRSENWVHQYLGQQFYLRVYSPANSWRDEYPIPSNALRCGKAVGHY 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00931 538 PANTHER MULTI-COPPER OXIDASE 45 507 IPR045087 -
Vian5g00931 538 SUPERFAMILY Cupredoxins 344 534 IPR008972 -
Vian5g00931 538 Pfam Multicopper oxidase 34 147 IPR011707 GO:0005507
Vian5g00931 538 Gene3D - 27 148 IPR008972 -
Vian5g00931 538 Pfam Multicopper oxidase 378 512 IPR011706 GO:0005507|GO:0016491
Vian5g00931 538 CDD CuRO_1_AAO_like_1 29 145 IPR034273 GO:0005507
Vian5g00931 538 CDD CuRO_3_AAO_like_1 375 497 IPR034275 GO:0005507
Vian5g00931 538 SUPERFAMILY Cupredoxins 156 334 IPR008972 -
Vian5g00931 538 SUPERFAMILY Cupredoxins 24 174 IPR008972 -
Vian5g00931 538 FunFam Monocopper oxidase-like protein 344 538 - -
Vian5g00931 538 Pfam Multicopper oxidase 160 296 IPR001117 -
Vian5g00931 538 Gene3D - 158 333 IPR008972 -
Vian5g00931 538 FunFam Monocopper oxidase-like protein 158 332 - -
Vian5g00931 538 Gene3D - 343 536 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00931 Vian-Chr5 30504322 30508503 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00931 - - gmx:100797670 1066.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g00931 5 30504322 30508503 Vian5g00931 5 30504322 30508503 ECH