Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00923 ATGACTTGGAAGAGCAGAGGAGAATTGCCTTCTAGAAGCGTTATTTCGCAGAGATGGGCATTGTTTTTGTGCTTCGGAAGCTTCTGTGCTGGAATGCTCTTCACTACCAGGATATGGACAATTCCTGAAAATAACAAAGGACTAGCCCGACCCACGGCTGCAGAAACTGATAAATTGAATGTTGTTTCAGAAGGTTGCAATTCCAGAATTATGCAAGAATTGGAAATGAAGCGCGATAAAGACATTTATGGGGAAGTTTACAAGAGTCATAATTCCATTCAAACGTTGGACAAGACTATTTCAAACTTAGAGATGGAATTGGCTGCTGCAAGGGCAACTCAGGAGTCTCTACGAAGTGGTGCTCCTGTTTCAGATGATATAAGGATGAGTGAATCATCTGGTAAGAGAAAGTACCTTATGGTCGTTGGTATTAATACTGCATTTAGCAGCAGGAAAAGAAGGGACTCGGTTCGTGCCACTTGGATGCCACAAGGTGAGAAAAGAAAGAAGCTAGAGGAGAAGGGTATCATCATCCGCTTTGTAATTGGACACAGTGCTACATCAGGGGGAATTCTAGACAGAGCTATTGAAGCTGAGGACAGAAAGCATGGAGATTTCTTGAGGCTGAATCATGTGGAAGGATACCTTGAATTGTCAGCAAAGACAAAAACCTATTTTGCCACTGCTGTGAACTTGTGGGATGCTGATTTCTATGTCAAAGTTGATGATGATGTTCACGTAAATATAGCAACACTGGGGGAAACTCTGGTTAGGCACCGATCGAAACCACGCATATACATTGGATGCATGAAATCTGGGCCAGTCCTATCTCAAAAAGGAGTAAGATACCATGAACCTGAGTACTGGAAATTTGGAGAGGCTGGAAACAAGTATTTCCGACATGCCACAGGGCAGTTGTATGCCATTTCAAACGATTTGGCTACATACATATCAATTAACCAGGATGTTCTTCACAAGTATGCCAACGAGGATGTCTCACTAGGATCTTGGTTTATTGGACTTGATGCGGAGCATATAGATGATAGAAGACTTTGCTGTGGCACTCCTCCAGATTGTGAGTGGAAGGCCCAAGCAGGCAACATTTGTGTTGCATCGTTTGATTGGAGCTGCAGTGGAATTTGCAGGTCTGCTGAGAGGATTAAAGAGGTACATAGGAGGTGTGGAGAGGGTGAGAATGCTTTGTGGAGTGCCTCTTTCTAG 1221 0.4349 MTWKSRGELPSRSVISQRWALFLCFGSFCAGMLFTTRIWTIPENNKGLARPTAAETDKLNVVSEGCNSRIMQELEMKRDKDIYGEVYKSHNSIQTLDKTISNLEMELAAARATQESLRSGAPVSDDIRMSESSGKRKYLMVVGINTAFSSRKRRDSVRATWMPQGEKRKKLEEKGIIIRFVIGHSATSGGILDRAIEAEDRKHGDFLRLNHVEGYLELSAKTKTYFATAVNLWDADFYVKVDDDVHVNIATLGETLVRHRSKPRIYIGCMKSGPVLSQKGVRYHEPEYWKFGEAGNKYFRHATGQLYAISNDLATYISINQDVLHKYANEDVSLGSWFIGLDAEHIDDRRLCCGTPPDCEWKAQAGNICVASFDWSCSGICRSAERIKEVHRRCGEGENALWSASF 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00923 406 Coils Coil 93 113 - -
Vian5g00923 406 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 97 346 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vian5g00923 406 Pfam Domain of unknown function (DUF4094) 16 112 IPR025298 -
Vian5g00923 406 Gene3D - 135 348 - -
Vian5g00923 406 Pfam Galactosyltransferase 152 347 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vian5g00923 406 FunFam Hexosyltransferase 132 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00923 Vian-Chr5 30373757 30377323 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00923 1 406 Glycosyltransferase AT1G05170 77.696 0.0 682
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00923 K20855 - gmx:100794838 803.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g00923 5 30373757 30377323 Vian5g00923 5 30373757 30377323 ECH
Vian11g00673 11 7047114 7050347 Vian5g00923 5 30373757 30377323 PCT