Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00914 ATGGAATTGTGCTTCATCTCAGAAGGCCAATGGGGTACCAGAAATGGTAGCCAAACTACTGAATATGTTGTCCAAGCTGACATGATGTGTAACATTTCTGTATTTGTGAACAAGTCTCAGGGCTCTCCAATATCTACTGAGGTTGATGAGTTGCCTCCTGCTTTCCCTCCAAGTACACAGCCACAACCCTTTATTCCTCTTATAGCTCCTTCCCCATTGAGACCTTTCACAAATAATTCTGTGCCCAAGTTATCAGGTCTGTTGTTGGTTGTCGAAATGGTGAATAGTGGGGAGCAGGGCCATGGCCAAGATTTTAATCGCAGGGAAGGGAGGCCAAGACCCAAATGCTATGGTATGGTGCAACAATATGGGTTTGTACCTGAAGACTCGTGCTATTTTTTCTGGGTAGAAGATGCGGGCAGTGTTATGGTAATGGGCCTTTGTTCATTGAATTTCTCTGCTGCTCAAGATATAATGACCACAACTGCTACTGATTGCTGGACATCCTTTGCTCCATATTTGGCAAATGTTGTATGTTGTCCTCAATTTGATGCCATGTTGGTGACCCTCATAGGGCAGTCGAGCAAATACTCTGGGGTGCTAGCTTTGAACGCAACTCATGCTAGTCACTGCCTCTCTGATGTTCAGAAGGTCCTTGTCAGTCAAGGAGCAAGTGAGAACCTAAAAGAAATATGTTCAGTCCACCCAAGAAATCTCACTGAGGCCTCTTGTCCTGTTGTATCTGTGGATGAATTTGAGAGTGTTGTAGATACTTCGAGACTGCTGACTGCTTGTAGAAAAATTGATCCTGTAAATGAGTGTTGTGATCAAGTTTGCCAAAATGTCATACACTATGCTGCTAGAAAAATTGCCTTAAATGATTTGTCTACTTCAGATGGAAACCATAGCATGCCTGGGCCAAAAGCTAGGATCAATGATTGCAAGAATATTGTTGTACGTTGGTTGGCTAGTAAACTTGATCCATCCACTGCAAATAGTGTTTTTAGAGGACTTTCAAATTGCAACCTAAACAAAGTATGCCCATTGGATTTTCCAAGTGTCTCAAGTGTTGTGAAAGAATGTGGCCATCTCATACATAACCAAACAGCTTGCTGCAAAGCCATCAAAAGTTATGTGTCCTATTTGCAAGAACAGAGCTTTGTAACCAATCTGCAGGCCTTGAAATGTGCTGCATCACTTGGGAAGAAATTGCAGAGTGCAAACGTCTCCAAGGATGTTTATAGCCTTTGTCATATAAGCCTGAAGGACTTTTCTCTTCAAGTTGGATTGCAAGAATCTGGCTGCCTTTTGCCGAGTTTGCCTTCAAATGCAGTATTTGATGGAACTTCAGGGATTGGATTCATTTGTGACCTTAATGACAACATTGTAGCTCCATGGCCCACATCTTCATATCTGCTTTCATCCTCATGCAATAGAAGTACGTATAAGCTCTATCAAGAATTTCTAGCTGATTGCTCTCATTCTCAATTACAATCCTTTATGACAAATTAA 1512 0.4193 MELCFISEGQWGTRNGSQTTEYVVQADMMCNISVFVNKSQGSPISTEVDELPPAFPPSTQPQPFIPLIAPSPLRPFTNNSVPKLSGLLLVVEMVNSGEQGHGQDFNRREGRPRPKCYGMVQQYGFVPEDSCYFFWVEDAGSVMVMGLCSLNFSAAQDIMTTTATDCWTSFAPYLANVVCCPQFDAMLVTLIGQSSKYSGVLALNATHASHCLSDVQKVLVSQGASENLKEICSVHPRNLTEASCPVVSVDEFESVVDTSRLLTACRKIDPVNECCDQVCQNVIHYAARKIALNDLSTSDGNHSMPGPKARINDCKNIVVRWLASKLDPSTANSVFRGLSNCNLNKVCPLDFPSVSSVVKECGHLIHNQTACCKAIKSYVSYLQEQSFVTNLQALKCAASLGKKLQSANVSKDVYSLCHISLKDFSLQVGLQESGCLLPSLPSNAVFDGTSGIGFICDLNDNIVAPWPTSSYLLSSSCNRSTYKLYQEFLADCSHSQLQSFMTN 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00914 503 PANTHER GPI-ANCHORED PROTEIN 143 482 IPR040336 -
Vian5g00914 503 Pfam SPARK 147 300 IPR043891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00914 Vian-Chr5 30240448 30243639 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00914 - - vra:106756607 710.679