Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00911 ATGCCCCAGTTTGGCACCAAACTCAACAACTCAACCACCATAAGGCGACGCTTTCACCACCGCGTTTCCCTGCTACGCCGCTGCATCCTCCGTGTCCTCCACCGCATCCTGCTCTGTTCCGGGAGGAAGACCAACAGCACCTACAGCATGCTGCCTCCAGCATTACCCTCTCCGCCGCTGCCCCCGACCGCAGAATCACCCGGCGAAATTGCTCGTGAAGAGATGGATGTCGCGCCGCCGGCGATGTTTCAAACCCATGATTTGGATTCTGACTTGGTCTCCTTGAAGATCAGCTTGTTGGGAGATTGCCAAATTGGAAAAACCAGCTTTTTGGTGAAATATGTTGGGGATGAAAAGGAGAAGCATGGTAGCCAGATGGAAGGGTTAAATCAGATGGACAAAACACTGGTCGTTAAAGGGGTTCGCATCTCGTACTGTATCTGGGAAGTACAAGGTGATGGAAAAACAGAAGATCGAATTCCGATGGCTTGCACGGATTCTGTGGCGATTTTGATTATGTTTGATCTAACAAGTCGATGCACATTAAACAGTGTTCTCGGTTGGTACAAAGAAGCCAGGAAATGGAATCAGACAGCAATACCAGTGTTGATAGGAACCAAGTTTGATGATTTTATCCAGCTGCCTATTGATATCCAATGGACTGTTGCTAATGAGGCAAGAAAATATGCAAAGGCCCTGAATGCTGCCTTGTTCTTTTCCAGTGCAACTTACAACATCAACGTGAATAAGATCTTCAAGTTCATCACTGCTAAACTTTTCGACCTACCATGGAAAGTGGAAAGAAATTTGAATGTTGGGGAGCCCATCATTGACTTCTGA 840 0.4714 MPQFGTKLNNSTTIRRRFHHRVSLLRRCILRVLHRILLCSGRKTNSTYSMLPPALPSPPLPPTAESPGEIAREEMDVAPPAMFQTHDLDSDLVSLKISLLGDCQIGKTSFLVKYVGDEKEKHGSQMEGLNQMDKTLVVKGVRISYCIWEVQGDGKTEDRIPMACTDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQTAIPVLIGTKFDDFIQLPIDIQWTVANEARKYAKALNAALFFSSATYNINVNKIFKFITAKLFDLPWKVERNLNVGEPIIDF 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00911 279 FunFam Septum-promoting GTP-binding protein 1 85 269 - -
Vian5g00911 279 SMART rab_sub_5 95 262 - -
Vian5g00911 279 PANTHER - 92 266 - -
Vian5g00911 279 Pfam Ras family 96 259 IPR001806 GO:0003924|GO:0005525
Vian5g00911 279 ProSiteProfiles small GTPase Rab1 family profile. 89 279 - -
Vian5g00911 279 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 95 272 IPR027417 -
Vian5g00911 279 SMART rho_sub_3 97 261 IPR001806 GO:0003924|GO:0005525
Vian5g00911 279 Gene3D - 86 271 IPR027417 -
Vian5g00911 279 PRINTS Transforming protein P21 ras signature 237 259 - -
Vian5g00911 279 PRINTS Transforming protein P21 ras signature 197 210 - -
Vian5g00911 279 PRINTS Transforming protein P21 ras signature 95 116 - -
Vian5g00911 279 PRINTS Transforming protein P21 ras signature 136 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00911 Vian-Chr5 30162576 30164397 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00911 K07976 - gmx:100780638 461.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g00911 5 30162576 30164397 Vian5g00911 5 30162576 30164397 ECH