Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00898 ATGACTCACTTCGTCACTCCTCAGCTCGTCCGAGTCACGCCTTTCATTCATCTCTCCAAACATCTCCTCGCAACATCAATTTCTTGTTCCCAAACCCTCTCTCTCCCCAAATTCTCTACCAAAACCTCCGCCCTCGCCCGCTGCCGAACGCACTCTCCATTTCCCCCGGCGATGGATGCGAAACCGCCGGAATCCGCCGCCTCGGGCGAGGACTTCGTCCACGTCCCGGATCTGAAGATGGAGAGTTTGTCTGAGAGCATAGTTCGAATTGACGAGCCCTCCGACGCCGACGCTGCTCCCTCAACGTCGGATGACGCGCCGGATTCCGATCACCGTCAGGTCACTCTCCCGGAGGAGCTATCCAGAAACGTTCTAGTCCTCTCGTGCGAGTCTGCCGCCGAAGGCGGCGTCTGCGACGTTTACTTGGTCGGAACCGCTCATGTCTCTGAGGAATCAAGCAGAGAAGTTCAAGCTATAGTGAATTTTCTTAAACCGCAGGCCGTCTTCCTAGAGTTGTGCTCCAGTCGTGTTGCTGTGCTTACCCTTCAAAATCTCAAGGTACCCACTGTGGGAGAAATGGTTACAATGTTGAAGAAAAAACATAATATGTTTGAAGTGCTTTATGGCTGGTTCCTTGCCAAGATTGCTAGTAAACTTGAGGTCTTTCCTGGCTCTGAGTTTCGTGTGGCATATGAAGAAGCCATCAAGTATGGTGGCAGAGTGATACTTGGTGATCGCCCTGTACAGATTACATTAAGGAGAACATGGAGTAAGATGCCACTTTGGCATAAAACAAAACTGTTATACTCTTTACTTTTCCAGGCAGTTTTTTTACCCAGCTCTGATGATCTTAACAAGATGCTGAAGGAAATGGATGACAGTGACATGCTAACTCTGGTTATACAGGAAATGAGTAAGGAGTTTCCGACTTTAATGGAGACTCTTGTGCATGAACGAGATCAGTACATGTCCTCCACATTATTAAAAGTGGCGAGTGAAAATAGCTCAGTTGTTGCTGTTGTTGGAAAGGGTCATTTACAGGGAATAAAGAAGCATTGGAAGCAACCTGTCGTGATGAAGGATCTCATGACAGTTCCATCTGTTGAACCAGCTGTATCTGCAATAAGAATCGTGACATCCGTTGGTGTTGTCGTGGCTGGGGTGGCCATTATATCAGGAATCTATCTTTCATGCAAGAAATAA 1203 0.4788 MTHFVTPQLVRVTPFIHLSKHLLATSISCSQTLSLPKFSTKTSALARCRTHSPFPPAMDAKPPESAASGEDFVHVPDLKMESLSESIVRIDEPSDADAAPSTSDDAPDSDHRQVTLPEELSRNVLVLSCESAAEGGVCDVYLVGTAHVSEESSREVQAIVNFLKPQAVFLELCSSRVAVLTLQNLKVPTVGEMVTMLKKKHNMFEVLYGWFLAKIASKLEVFPGSEFRVAYEEAIKYGGRVILGDRPVQITLRRTWSKMPLWHKTKLLYSLLFQAVFLPSSDDLNKMLKEMDDSDMLTLVIQEMSKEFPTLMETLVHERDQYMSSTLLKVASENSSVVAVVGKGHLQGIKKHWKQPVVMKDLMTVPSVEPAVSAIRIVTSVGVVVAGVAIISGIYLSCKK 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00898 400 PANTHER PHEROMONE SHUTDOWN PROTEIN 99 400 IPR046345 -
Vian5g00898 400 Pfam TraB/PrgY/gumN family 136 355 IPR002816 -
Vian5g00898 400 CDD TraB_PrgY-like 140 353 IPR046345 -
Vian5g00898 400 MobiDBLite consensus disorder prediction 91 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00898 Vian-Chr5 29929526 29950089 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00898 - - gmx:100810061 627.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g00898 5 29929526 29950089 Vian5g00898 5 29929526 29950089 ECH