Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00850 ATGCAATCATTCTCCCTCAGTCTCGCGTGCCTTGCTTTTTTCATCTCGCTCTTCCTACTACAACGACAACCTTTTTCTCATGCCAGTCTACTGTCCGAACCGGTTAGTAACCCGAACCAGCCTCTCGAACCGGGCCAATACCCCTCCTCCAACACGGTTCCCGCATTCCCGGTTCAGACCCAGACGCAGACCTGCCGGCTTGACCTCTCCAATGAGCTCTTCGGCGGAGTGAAGGACGCGTGCGGCAAGGACCTCGACCGGAGCCGCTGCTGCCCCGTCCTGGCCGCGTGGCTCTTCGCTGCACACGCCCGCTCTGCCCTCGAGGTCTCTGGTGCGCCGCCGCCGGCCTCCGGCGACCTCCCCATGATGCCCGATGACTCCCAGAAATGCGTTAACTCCCTCCAAGACTCGCTTCTCACTCGCAATATCCGAATCCCCCAACCCAACGCCACCTGCGACGCCATCCTCTGCTTCTGCGGCATCAGACTACACCAAATAACATCCTTAACTTGCAACGCAGCGTTCAACGTTTCTCTCTCCCACAAAAACGCCACCCCTACCGCCGCCGTTCGCAACTTAGAAAACAATTGTCGCAACTCCTCTTACGCCGGCTGCACCAGATGCCTCGGCGCCCTACAAAAGGTGAAAGGGTACAAGAACGAGACAAAGGGTAGTGGAGGAAGCGAGAGGGTGAAGAAAATGTTCAACCGGGACTGTCAACTGATGGGGTTAACTTGGCTGCTTGCAAAGAACAAAACGGCATACATACCCACCGTTTCGGCGGTGTTGCGCGCGATGATGTACAGCGCGCATCCGCATGAGTCAAAATGCAGTCCCGATCAAGAGAACATGCCACTGGCAGTTGATTCGCTTCAGTTCGAGAGTGGAAAAGGCGCATCGCGGCCGTCGAAGTTTATGGTGACGGTTTTGGCCCTGGTGGGTCTGTTATTTTCATGTTTTGTGTAG 966 0.5631 MQSFSLSLACLAFFISLFLLQRQPFSHASLLSEPVSNPNQPLEPGQYPSSNTVPAFPVQTQTQTCRLDLSNELFGGVKDACGKDLDRSRCCPVLAAWLFAAHARSALEVSGAPPPASGDLPMMPDDSQKCVNSLQDSLLTRNIRIPQPNATCDAILCFCGIRLHQITSLTCNAAFNVSLSHKNATPTAAVRNLENNCRNSSYAGCTRCLGALQKVKGYKNETKGSGGSERVKKMFNRDCQLMGLTWLLAKNKTAYIPTVSAVLRAMMYSAHPHESKCSPDQENMPLAVDSLQFESGKGASRPSKFMVTVLALVGLLFSCFV 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00850 321 Pfam SPARK 60 223 IPR043891 -
Vian5g00850 321 PANTHER GPI-ANCHORED PROTEIN 7 316 IPR040376 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00850 Vian-Chr5 28902914 28904407 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00850 - - vra:106777532 642.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g00850 5 28902914 28904407 Vian5g00850 5 28902914 28904407 ECH
Vian11g00737 11 7913792 7915218 Vian5g00850 5 28902914 28904407 PCT