Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00848 ATGGCATCACACCAGGCAATGGCTTCTTCTTCCTTCATCAGCAACTTCATAATTCCCGACCACATTCTCGTACCGGGCTCTCACGTTGGAAATGAGGGCCACCAGCCTGAGTGTCCCGTCCTCGTTTTTGTCAACTCCAGGAGTGGCGGTCAACTCGGAGGAGATCTTCTCCAAACCTATCGCAATTTACTTAATCCAAAACAGGTTTTTGATTTGGGGGAGCAGGCGCCTGATGAGGTTCTCAGAACGGTGTATGCTAATTTGGAAAGCCTTAATCTGCAGGGTGATCAGTTTGCTAAAACGATCATGAAGAAATTGAAGTTAATTGTTGCAGGGGGTGATGGAACAGCAGGCTGGCTTCTTGGAGTTGTTTGTGATCTCAAATTATCTCACCCTCCACCTATTGCCACTGTGCCACTGGGCACAGGGAATAATCTGCCTTTTGCGTTTGGTTGGGGGAAGAAGAACCCAACAACAGATCAAGGATCAGTAGAGTCATTTTTAAATCAAGTCATGAAGGCAAAGGAAATAAAAATTGACAACTGGCACATTCTCATGAGAATGAGAGCTCCTAAAGAAGGTTCCTGTGATCCAATTCCACCACTTGAGCTACCACATTCTTTGCATGCCTTCCATCGTGTATCTGAAGCAGATGAGCTTAATAGGGAAGGTTGCCACACGTTTCGTGGGGGATTTTGGAATTACTTCAGTATGGGAATGGATGCTCAAGTGTCTTATGCATTTCATTCAGAACGAAAGAAGAATCCTGAAAAATTCAAAAACCAGTTGGTTAATCAGACTACTTATGCTAAGCTTGGATGCTCACAAGGATGGTTTCTTACTCCTCTTTTGCACCGTGCCGATAGGAACATAGCACAACTGGCTAAAGTAAAATTCATGAAAAGGCATGGTGAATGGCAAGACCTACACATACCTCCTAGGTCAATTGTATGTCTTAACTTGCCCAGCTTTTCTGGTGGACTAAATCCATGGGGTACACCTAACAGGAGAAAGCAGAGTGACAGAGATTTGACACCACCATTTGTTGATGATGGCCTACTAGAAATTGTTGGTTTTAGAAATGCGTGGCATGGCCTTGTTTTATATGCTCCAAAAGGACACGGAACGCGTCTTGCTCAGGCACACAGAATCCGTTTTGAGTTTCGGAAAGGTGCTGCCGATCATACATTCATGAGGATTGACGGGGAGCCTTGGAAGCAACCCCTTCCGGTTGATGATGATACAGTTGTGGTTGAGATTTCTCACCTTGGCCAGGTTAGCATGCTATCTACGGCTGATTGCAAGTCTAAAAGTATGTATGATCCTTTATCACCACGCCATGAGGTTGAGGAAGATGACAGTGATGAAGATGCCTCTCCATCAGAGGAATTTCGGAAGTTTGGTGCAGCAGATACATTTAAAATCCCATATGACATTGACCCTTCTCGTCTTAGTTAG 1458 0.4465 MASHQAMASSSFISNFIIPDHILVPGSHVGNEGHQPECPVLVFVNSRSGGQLGGDLLQTYRNLLNPKQVFDLGEQAPDEVLRTVYANLESLNLQGDQFAKTIMKKLKLIVAGGDGTAGWLLGVVCDLKLSHPPPIATVPLGTGNNLPFAFGWGKKNPTTDQGSVESFLNQVMKAKEIKIDNWHILMRMRAPKEGSCDPIPPLELPHSLHAFHRVSEADELNREGCHTFRGGFWNYFSMGMDAQVSYAFHSERKKNPEKFKNQLVNQTTYAKLGCSQGWFLTPLLHRADRNIAQLAKVKFMKRHGEWQDLHIPPRSIVCLNLPSFSGGLNPWGTPNRRKQSDRDLTPPFVDDGLLEIVGFRNAWHGLVLYAPKGHGTRLAQAHRIRFEFRKGAADHTFMRIDGEPWKQPLPVDDDTVVVEISHLGQVSMLSTADCKSKSMYDPLSPRHEVEEDDSDEDASPSEEFRKFGAADTFKIPYDIDPSRLS 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00848 485 Gene3D - 38 185 IPR017438 -
Vian5g00848 485 PIRSF DAG_kinase_plant 3 435 IPR016961 GO:0004143
Vian5g00848 485 Gene3D - 231 412 - -
Vian5g00848 485 SMART dagk_c4b_2 234 404 IPR000756 GO:0004143|GO:0007205
Vian5g00848 485 Pfam Diacylglycerol kinase catalytic domain 39 164 IPR001206 GO:0016301
Vian5g00848 485 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 37 411 IPR016064 -
Vian5g00848 485 PANTHER DIACYLGLYCEROL KINASE 33 434 IPR037607 GO:0004143|GO:0007165
Vian5g00848 485 Pfam Diacylglycerol kinase accessory domain 232 404 IPR000756 GO:0004143|GO:0007205
Vian5g00848 485 SMART dagk_c4a_7 39 182 IPR001206 GO:0016301
Vian5g00848 485 FunFam Diacylglycerol kinase 38 181 - -
Vian5g00848 485 ProSiteProfiles DAG-kinase catalytic (DAGKc) domain profile. 35 188 IPR001206 GO:0016301
Vian5g00848 485 MobiDBLite consensus disorder prediction 437 465 - -
Vian5g00848 485 FunFam diacylglycerol kinase 231 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00848 Vian-Chr5 28852533 28859518 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00848 10 476 Acyl Lipid Metabolism Gene Families AT2G20900 73.585 0.0 725
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00848 K00901 - gmx:100817198 844.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g00848 5 28852533 28859518 Vian5g00848 5 28852533 28859518 ECH