Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00846 ATGAGTTCAACAATTAGAGCATGGAGTGTGGCAACTAGTGTTGGAGTTGTGGAGGCCTTGAAAGATCAAGGCATCTGCAGGTGGAACCATGCTTTCAGATTAGCTCAACAGCGTCTCAAAATTCATGTCACTTCGCTTTCTCAAGCACAAAACCTTTCTTCCTCTTCTTCTGCTATCATCTCCACAACACCAAAACACGAGAAGCTAAAACAGTCAGAGGACTCCATGAGAACCGTCATCTACTTAAGCTGTTGGGGTCCCAACTAG 267 0.4494 MSSTIRAWSVATSVGVVEALKDQGICRWNHAFRLAQQRLKIHVTSLSQAQNLSSSSSAIISTTPKHEKLKQSEDSMRTVIYLSCWGPN 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00846 88 PANTHER DUF3774 DOMAIN PROTEIN-RELATED 1 88 IPR022251 -
Vian5g00846 88 Pfam Wound-induced protein 10 87 IPR022251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00846 Vian-Chr5 28838165 28838431 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00846 - - gmx:100778355 125.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g00846 5 28838165 28838431 Vian5g00846 5 28838165 28838431 ECH
Vian11g00749 11 8038293 8038559 Vian5g00846 5 28838165 28838431 PCT