Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00843 ATGGCGGTGGAGAGTGTCAAAACGGGTTCTGATGGGAAAGTTTGGAGCTTTTGTAGTATGCCATTTTGGCAAACAACTCATCCTTCTTCGTCTTCTTCAACTTCCTCTATGCATAACAGTGTTCACCATCAGAGCCAGATTCTTCAATCTCTTGATAGATCCACTTATCAACCTTCCACCACTGTTTCTTCTGTGGCTAAGTCTTTGCTCCCAACAAGGAGAAGACTCCGTCTTGATCCTCCCAACAAGCTCTACTTTCCTTATGAACCTGGTAAGCAAGTTAGGAGCGCCATCGCAATTAAAAACACTTGCAAGTCTCATGTAGCTTTCAAGTTTCAAACAACTGCACCCAAGAGTTGTTATATGCGCCCTCCAGGTGGTATACTTGCACCTGGTGAAAGTATTATTGCAACTGTGTTTAAGTTTGTGGAGCCACCAGAGAACAATGAGAAACCAATTGATCAGAAAAGCAGGGTTAAGTTCAAAATCATGAGCTTAAAAGTGAAAGGCGAAATGGACTATGTACCAGAACTGTTTGATGAGCAAAGGGATCATGTTGCAGTGGAGCAAATTTTGCGTGTCATTTTTCTGGACCCTGAACGCCCTAGCCCTGCTTTGGATAAGCTTAAACGGCAGTTAGCTGAGGCAGAGGCTGCATTGGAAGCAAGAAAGAAGCCCCAAGAGGAGACAGGTCCTCGAGTTGCTGGAGAAGGACTTGTTATAGATGAATGGAAAGAAAGAAGAGAAAGATACCTGGCCAGGCAGCAGGTTGAAGTGGTAGATTCAATGTAA 792 0.4407 MAVESVKTGSDGKVWSFCSMPFWQTTHPSSSSSTSSMHNSVHHQSQILQSLDRSTYQPSTTVSSVAKSLLPTRRRLRLDPPNKLYFPYEPGKQVRSAIAIKNTCKSHVAFKFQTTAPKSCYMRPPGGILAPGESIIATVFKFVEPPENNEKPIDQKSRVKFKIMSLKVKGEMDYVPELFDEQRDHVAVEQILRVIFLDPERPSPALDKLKRQLAEAEAALEARKKPQEETGPRVAGEGLVIDEWKERRERYLARQQVEVVDSM 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00843 263 MobiDBLite consensus disorder prediction 29 55 - -
Vian5g00843 263 ProSiteProfiles Major sperm protein (MSP) domain profile. 75 197 IPR000535 -
Vian5g00843 263 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 74 257 IPR016763 GO:0005789
Vian5g00843 263 Pfam MSP (Major sperm protein) domain 76 186 IPR000535 -
Vian5g00843 263 SUPERFAMILY PapD-like 64 204 IPR008962 -
Vian5g00843 263 FunFam vesicle-associated protein 4-1-like 71 200 - -
Vian5g00843 263 Gene3D Immunoglobulins 71 201 IPR013783 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00843 Vian-Chr5 28781266 28783418 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00843 - - gmx:100820576 475.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g00843 5 28781266 28783418 Vian5g00843 5 28781266 28783418 ECH
Vian11g00752 11 8047965 8051328 Vian5g00843 5 28781266 28783418 PCT