Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00835 ATGAAACATAGGAGTTGCAGGGAGTTAAGAAGCAACGTCAATGGCTTCGAAGAAGACGATGAAATGAAGAAACTTGATTCTGATACTGCTCCTAAAAGACTCACCTTGAACGAAAATAAAACACCCATCAAAGAAACTTTCGTTATTCTAAGAATTGAATTGACACAGAATCAGATACCACATTCTCTGGCAAGAACATGGATTTCGAGAGAAGAGGGTACGAAGGTTTTTTCTAAATACATGGGAACAAAAGGGGAAGATTCTCACGATTCATGGGTGTCGAAGACGCACAAAGCGGTGAAGAAAGCTAACAATTCTGTCATTGGGTACGTGAGTTCCAAGTCTCACTGGGCATTGTCTCATGGCCACATTAGCCTGAGATCACCTCAACCCAAAAGTGTGGAGAAGATTGTGAGCAAGGGCATTGATCTCTTCAGACACAAGAAACCTTTAAATATTGAGTTGGTTCATCAACTACGTTTGCTTGATAATCGTTTCATCCAATGGCGGTTTGCAAATGCAAGAGCTTGTGCTGTGAATCACACCATTTTCCTTCAAGTTTGGGGAAATTTCATATGTGCTTTGAATACTCAAGCCAAACTGCGATATTCAATGGTACTAACGAGGATAGAAATTGAGAGAGAGAAGCTTGAGATGAAACTGGATGGTATAATGCAATCTCAAATGAAGCTATTGAAAACATGGAGAAGTATGAAAAGGCAATATGTAGCTGCAATCACCTTATTGCAAGAATGTTTGTATTCTGTTGCATGCAGAGTTCATCTTTTGGAAGGTGCTCAGGTGGATTTGAAATTAGCATCAGTTTCTCAGAAGCGTGCATTGAAGCTAACAGATTCCATGAACTCTTCATTATCAGCTTTTTTACCCTTGGCTGACGAGATTGCTGGATTGCTATCAGAATTAGCAGAAGTTGTTGTACAGGAGAAGTTTCTCTTACAGGAATTCAATGATATGTTCCATACCATGTGTCTCCTTCAGCTTGAAGAAAGCAGCCTGAGGTGCAGTCTTATTCAACTTAATTCTTGA 1047 0.3983 MKHRSCRELRSNVNGFEEDDEMKKLDSDTAPKRLTLNENKTPIKETFVILRIELTQNQIPHSLARTWISREEGTKVFSKYMGTKGEDSHDSWVSKTHKAVKKANNSVIGYVSSKSHWALSHGHISLRSPQPKSVEKIVSKGIDLFRHKKPLNIELVHQLRLLDNRFIQWRFANARACAVNHTIFLQVWGNFICALNTQAKLRYSMVLTRIEIEREKLEMKLDGIMQSQMKLLKTWRSMKRQYVAAITLLQECLYSVACRVHLLEGAQVDLKLASVSQKRALKLTDSMNSSLSAFLPLADEIAGLLSELAEVVVQEKFLLQEFNDMFHTMCLLQLEESSLRCSLIQLNS 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00835 348 PANTHER AUGMIN FAMILY MEMBER 74 347 - -
Vian5g00835 348 Pfam QWRF family 92 320 IPR007573 -
Vian5g00835 348 Coils Coil 207 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00835 Vian-Chr5 28680895 28682518 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00835 - - vra:106780229 662.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g00835 5 28680895 28682518 Vian5g00835 5 28680895 28682518 ECH