Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00833 ATGAGGAAAAATGCAGGTTCTCATTCAGGAAGGATGTTTAGTGACAGGAAGTGGATTCTCCCTTTTTTTGCAAGTTTGATTATATCTATGAGTCTGGTTCTGACAGCTATTCTTGGGGCACTTAGTTCTGATAGTGGGGGAGAGCAATCACCGTTTGAAATCATTTCCTTCAAGAGATCAGAGAATTCCAATGGATATTTTGTGGAATCAGATATAGAAAGGTCTTCTAATGTTAGTGTGGTGAAAAGGGAGGCACCAAGGTTTGCCTACCTTATATCAGGCACCAAGGGTGATAGTCATAGGATGATGAGGACATTAGAGGCAGTGTACCACCCAAGGAATCAATACATCTTGCATTTAGATCTCGAGGCACCGCCCAGGGAAAGGTTGGAATTGGCAAATGCAGTGAAAGCTGATCCAGTTTTTCGTGAGGTGGAGAATGTTCGTGTTATGTCTCAATCCAATTTGGTAACTTATAAGGGTCCTACGATGATTGCTTGCACCCTCCAAGCTATTGCAATACTATTGAAGGAAAGTTCAGAATGGGACTGGTTTATTAACCTCAGTGCTTCAGATTATCCTCTTATGACACAGGATGATTTGCTTTATGTTTTCTCGAATCTGTCAAGAAATCTCAATTTCATCGAGCATACACACATTGCTGGTTGGAAATTGAATCAAAGAGCAAGGCCCATCATTATTGATCCCGCCCTTTACTTATCAAAGAAATCTGATTTAGCATTGACCACTCAACGAAGAACCCTTCCCACGTCTTTTAAACTGTTTACTGGTTCAGCTTGGGTTGTACTGACTCGGTCCTTTGTGGAGTACTGTATATGGGGATGGGATAACTTTCCACGGACTATGCTAATGTACTATACAAATTTTGTGTCCTCTCCAGAGGGATACTTTCACACTGTCATTTGTAACACTGAGGAATTCCGTCACACTGCCATAAGCCATGATCTTCACTACATTGCTTGGGACACTCCCCCAAAGCAGCATCCCATCTCCTTAACCATGAAGGACTTTGACAAAATGGTTAAAAGCAAGGCACTTTTTGCGCGCAAATTTGCTAAGGATGATCCAGTTCTAGACAAGATTGACAAGGAACTTCTGGGGCGCACCCACAGATTTTCACCTGGGGCTTGGTGTGTTGGAACCTCAGAAGGTGGGGCTGACCCTTGTTCCGTTCGTGGCAATGGTACAATGTTTAGGCCAGGCCCAGGTGCTGATAGGCTGAGTGAGCTGCTTCATGTGCTGTTATCTAAAGAATCTCTAAGCAAGCAGTGTTTGTGA 1299 0.4326 MRKNAGSHSGRMFSDRKWILPFFASLIISMSLVLTAILGALSSDSGGEQSPFEIISFKRSENSNGYFVESDIERSSNVSVVKREAPRFAYLISGTKGDSHRMMRTLEAVYHPRNQYILHLDLEAPPRERLELANAVKADPVFREVENVRVMSQSNLVTYKGPTMIACTLQAIAILLKESSEWDWFINLSASDYPLMTQDDLLYVFSNLSRNLNFIEHTHIAGWKLNQRARPIIIDPALYLSKKSDLALTTQRRTLPTSFKLFTGSAWVVLTRSFVEYCIWGWDNFPRTMLMYYTNFVSSPEGYFHTVICNTEEFRHTAISHDLHYIAWDTPPKQHPISLTMKDFDKMVKSKALFARKFAKDDPVLDKIDKELLGRTHRFSPGAWCVGTSEGGADPCSVRGNGTMFRPGPGADRLSELLHVLLSKESLSKQCL 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00833 432 PANTHER GLYCOSYLTRANSFERASE 15 431 IPR044610 GO:0015020
Vian5g00833 432 Pfam Core-2/I-Branching enzyme 88 347 IPR003406 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00833 Vian-Chr5 28651483 28654928 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00833 81 431 Glycosyltransferase AT1G03520 78.063 0.0 604
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00833 - - gmx:100795146 836.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g00833 5 28651483 28654928 Vian5g00833 5 28651483 28654928 ECH