Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00820 ATGATTTTCGATAAAGGGTCAATGCAATCCAAGTCTAATCTCGACTGCTTCCTCCGCCGTACGACACCTATTGTTCCGTCTCAGTTTCTTCCCAAGCACGAGATTCGAAACCTTAACCGTTTGTGGCACCCGTGGGAGAGAGAAGCGGTTGAGTACTTCACTTTGGGCGATCTCTGGAATCGGTTCGACGAATGGAGTGCTTACGGAGCTGGAGTTCCCATTTCCTTGTCCAATGAGGAGACACTTGTTCAGTACTATGTTCCCTACCTTTCTGCAATTCAAATATTCACCAGCAGCACTTTCAGGGAAGAGACAGAGTCAGGTGAGTGTGAGACAAGGGATTCGTACAGCGATTCCTACAGTGAAGAGAGTGAGTGTGATAAGCTATGGAGATGGGATGGAACTTCATCAGAGGAGGGAGGATCTGAGCATGAGTCTTTGTGGCACATGAATGATCGATTGGGTCATCTTTACTTTCAGTATTTTGAAAGATCAACTCCATATGGGAGAGTCCCTCTAATGGATAAGATCACTGGGTTAGCAGAAAGATACCCAGGGTTGATGTCACTGAGAAGTGTAGACCTTTCCCCAGCAAGTTGGATGGCAGTTGCATGGTACCCCATATATCATATTCCAATGGGAAGAACAATTAAAGATCTCTCAACATGCTTCCTCACATACCACACACTGTCATCTTCATTCCAAGATATGGATGTGGATGATGATACCGGAGGAGGGAAAGAGAAGAGAAAAGAAGGTGAAGGAATATCGCTGGCAGCATTTGGTTTGGCCACGTATAAGATGCAAGGGAATTTGTGGGTCTCAGGGAATTGTGGTAGGGACCAAGAAAGACTGGTCTCACTGTTGAGCGTGGCAGATTCATGGTTGAAGCAACTAAAGGTCCAACATCATGACTTTAATTACTTCATGGGCATTCGGCATGGCTGA 948 0.4578 MIFDKGSMQSKSNLDCFLRRTTPIVPSQFLPKHEIRNLNRLWHPWEREAVEYFTLGDLWNRFDEWSAYGAGVPISLSNEETLVQYYVPYLSAIQIFTSSTFREETESGECETRDSYSDSYSEESECDKLWRWDGTSSEEGGSEHESLWHMNDRLGHLYFQYFERSTPYGRVPLMDKITGLAERYPGLMSLRSVDLSPASWMAVAWYPIYHIPMGRTIKDLSTCFLTYHTLSSSFQDMDVDDDTGGGKEKRKEGEGISLAAFGLATYKMQGNLWVSGNCGRDQERLVSLLSVADSWLKQLKVQHHDFNYFMGIRHG 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00820 315 Pfam Protein of unknown function (DUF789) 12 309 IPR008507 -
Vian5g00820 315 PANTHER T15D22.8 9 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00820 Vian-Chr5 28240547 28243363 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00820 - - gmx:100799384 607.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g00820 5 28240547 28243363 Vian5g00820 5 28240547 28243363 ECH
Vian11g00772 11 8336769 8339178 Vian5g00820 5 28240547 28243363 PCT