Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00819 ATGGTTGGATCAAGATCATGGATAGGAGGACTCTTTCACCGCACAAGCACTAAGCGAAATAATGACAAATTTATTGACTATCCTTTGAGTCCCATTGAGGAGGAAAGACTTCAAAGGCTTCAAGAACGGGTGCAAGTGGCTTATGATGAAACTCGCCCCGAACATCAAGAAGCACTGAGAGCATTATGGGTGTGTTCCTTTCCCAATGTATCTCTGGAAGGCCTAATTTCTGACCAATGGAAAGATATGGGATGGCAAGGTCCTAATCCATCAACCGACTTTAGGGGATGTGGCTTCATTTCCCTTGAAAATCTACTGTTTTTCGCGAGGAAATACCCGGCATCTTTTCACAGGTTGTTACTGAAGAAAGAAGGAATGAGAGCAACCTGGGAGTACCCATTTGCTGTTGCTGGCATTAATATATCATATATGTTGATACAGATGTTGGATTTATACTCAGAAAAGCCACGATGTCTTCCAGGCTCGAATTTTGTCAAGTTATTAGGAGAAAATGAAGAAGCGTTCGATATTTTATACTGCATAGCGTTTGAGATGATGGATGCACAATGGCTGGCTATGCACGCTTCCTATATGGATTTTAACGATGTTCTAAATGCAACACGAATTCAATTGGAGAGAGAGCTTTCCTTAGAAGACATCAACAGAATTCAAGATCTGCCTGCTCACAATCTGTTGTAA 699 0.4149 MVGSRSWIGGLFHRTSTKRNNDKFIDYPLSPIEEERLQRLQERVQVAYDETRPEHQEALRALWVCSFPNVSLEGLISDQWKDMGWQGPNPSTDFRGCGFISLENLLFFARKYPASFHRLLLKKEGMRATWEYPFAVAGINISYMLIQMLDLYSEKPRCLPGSNFVKLLGENEEAFDILYCIAFEMMDAQWLAMHASYMDFNDVLNATRIQLERELSLEDINRIQDLPAHNLL 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00819 232 ProSiteProfiles ELMO domain profile. 54 215 IPR006816 -
Vian5g00819 232 Pfam ELMO/CED-12 family 39 204 IPR006816 -
Vian5g00819 232 PANTHER ENGULFMENT AND CELL MOTILITY 3 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00819 Vian-Chr5 28221513 28223630 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00819 K23538 - gmx:100800270 434.491