Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00814 ATGATGGAGAAGATCCAGCACAGTGAGGTGGAAGTGAAGGGACTGAAGCTGCACGTGGCAGGGATTGGAACTGGGTCCAAGGCAGTGCTATTCTTACATGGATTCCCAGAGATCTGGTACACATGGAGGCACCAGATGATTGCTGTGGCAAACGCTGGTTATAGGGCTATTGCCTTTGATTTCAGAGGCTATGGACTCTCTCAGCAACCAGCTGAGCCAGAAAAGGAAACCATGTTTGATTTAGTTCATGAAATTGTGGGTCTTTTGGATGCTTTAGGCATCACCAAGGCTTTTCTAGTTGGTAAGGACTTTGGTGCCTTCCCAGGACATCTTACAACTGCAGTGCACCCAGAAAGAGTTGCTGGTATCATAAGTTTAGGCATTCCTTTCATGCTTCCAGGTCCCTCTGCAGTGGAGGGTCACCTTCTGCTCCCCAAAGGGTTTTATATTACTAGTGAGATTCCAATTGCTGCTGATGATCAAGAAATCATGGACTTGTTTGACCCATCTACTCCCCTACCTCCATGGTTCTCTGAGGAAGATCTTGCAACCTATGCATCTTTATATGAAAAATCTGGATTCAGATATGCATTGCAGGTTCCTTATAGGAGTATCAATGTGGATGCTGGCATAAGTGATGTAAAAGTTAGTGTTCCATCACTTCTGATTGTGGGTGAGAAAGATTATGTGCTCAAGTTTCCAGGCATGGAGGACTATATTCGAAGTGGGGCGGTGAAAAACTTTGTTCCTGACTTGGAAATCACGTATATTCCAGAAGGAAGCCATTTTGTGCATGAACAAATGCCAGAGAAGGTGAACCAGCTCATCATTGAGTTCCTTGACAAACAAAGTGTCTAA 858 0.4464 MMEKIQHSEVEVKGLKLHVAGIGTGSKAVLFLHGFPEIWYTWRHQMIAVANAGYRAIAFDFRGYGLSQQPAEPEKETMFDLVHEIVGLLDALGITKAFLVGKDFGAFPGHLTTAVHPERVAGIISLGIPFMLPGPSAVEGHLLLPKGFYITSEIPIAADDQEIMDLFDPSTPLPPWFSEEDLATYASLYEKSGFRYALQVPYRSINVDAGISDVKVSVPSLLIVGEKDYVLKFPGMEDYIRSGAVKNFVPDLEITYIPEGSHFVHEQMPEKVNQLIIEFLDKQSV 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00814 285 PANTHER EPOXIDE HYDROLASE 6 282 - -
Vian5g00814 285 SUPERFAMILY alpha/beta-Hydrolases 2 282 IPR029058 -
Vian5g00814 285 Gene3D alpha/beta hydrolase 2 284 IPR029058 -
Vian5g00814 285 PRINTS Epoxide hydrolase signature 113 126 IPR000639 GO:0003824
Vian5g00814 285 PRINTS Epoxide hydrolase signature 53 68 IPR000639 GO:0003824
Vian5g00814 285 PRINTS Epoxide hydrolase signature 33 51 IPR000639 GO:0003824
Vian5g00814 285 PRINTS Epoxide hydrolase signature 257 279 IPR000639 GO:0003824
Vian5g00814 285 PRINTS Epoxide hydrolase signature 218 234 IPR000639 GO:0003824
Vian5g00814 285 Pfam alpha/beta hydrolase fold 28 167 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00814 Vian-Chr5 28106870 28109088 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00814 2 282 Acyl Lipid Metabolism Gene Families AT4G02340 34.069 3.62e-56 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00814 - - gmx:100802931 529.635